Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
seq2 82.4 5e-11
>seq1
Length=37976048
Score = 104 bits (114), Expect = 2e-17
Identities = 144/198 (73%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| |||||||||||| | || |||| |||||||| || ||||| ||
Sbjct 36315750 TCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAG 36315691
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| ||| | || | ||||||||||| |||||| || || ||
Sbjct 36315690 ATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 36315633
Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| | ||| | ||| || |||| || ||||| || || ||||| || ||
Sbjct 36315632 --TCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTT 36315575
Query 34967 CACAAAGATCTGCATATT 34984
||| || |||||||| ||
Sbjct 36315574 CACGAAAATCTGCATTTT 36315557
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| || || ||||| ||||| ||||| || ||| | ||| | || |||
Sbjct 21735279 ACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTCTTCC 21735338
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || ||||| || || || || ||||| || |||| | |||||||||||
Sbjct 21735339 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTCCTGG 21735398
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||| || || || || |||| || || ||| || || | ||| ||||| |
Sbjct 21735399 ATCTTGGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGTCT 21735456
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| |||||||| || || || |||||||||||
Sbjct 21735457 TACCCGTGAGGGTTTTGACGAAGATCTGCAT 21735487
>seq2
Length=51801758
Score = 82.4 bits (90), Expect = 5e-11
Identities = 148/214 (69%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| |||||||| || || ||| | ||| | || |||
Sbjct 36664900 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCCTCC 36664841
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || ||||| || || | || ||||| ||| | || | |||||||||||
Sbjct 36664840 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 36664781
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
||||| || || | | ||||| | ||| | ||| || || | || |||||
Sbjct 36664780 ATCTTGGCCTTCAC----GTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGT 36664725
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || | |||||||| ||||||||||||
Sbjct 36664724 CTTGCCAGTCAAGGTCTTCACGAAGATCTGCATA 36664691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632804749128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |