Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 289 3e-73 >seq1 Length=37976048 Score = 289 bits (320), Expect = 3e-73 Identities = 1183/1862 (64%), Gaps = 40/1862 (2%) Strand=Plus/Plus Query 46973 tttttCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || || ||||||| ||| | |||| || | || || |||||||||||||| || Sbjct 148844 TTTGTCAACGGTAAACTGAATCGCATTAACAGCCGGCTTCGTGCGTAAATAATACATCCC 148903 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 || || | || | |||| || |||||||| || |||| |||| || | || Sbjct 148904 TGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGG 148963 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 || | | |||||||| | ||| || |||||||||||||| |||| ||| || || Sbjct 148964 CTCAGCTACGTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGC 149023 Query 47153 CATATCTAAAATAACCCTTTG-TGGTATCTCCCATACTGTTTTATAAAT-TTGTTTAATG 47210 ||| | ||| || || || ||| ||||| || ||||| || | ||| || || Sbjct 149024 CATTT-TAATGCAAGTTTTCACTGATATTTCCCAGACCGTTTTGTACAGATTGCGTA-TG 149081 Query 47211 TCTTCTGGGAGAT----TAGTATTTTGAATAGATCCTCCgttttctataattttgttttt 47266 | || || | | || ||||||| || ||||| || | | || |||||||| Sbjct 149082 TGTTGCGGAATTTCCTCTA-TATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTT 149140 Query 47267 taattcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAAT 47326 | ||||| ||| || | ||||| | |||| | |||| |||| || | Sbjct 149141 CATTTCATCATCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACCAC 149200 Query 47327 TTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGA 47386 |||||||||||| || || || |||||| | || | || ||| || ||||| | ||| Sbjct 149201 TTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGA 149260 Query 47387 TTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCT 47446 || || || || | ||||| ||||| || || || ||||| | || | || | Sbjct 149261 CTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAGCGA 149320 Query 47447 ATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGA 47506 ||| | | || || | || | ||||| ||| | |||| Sbjct 149321 ATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATTCTGT 149380 Query 47507 TGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATA 47566 || | ||| | ||| ||||||||||||||| | || | ||| |||| ||| Sbjct 149381 GGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCATCATA 149440 Query 47567 TGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATA 47626 ||||| || ||||| | || ||| | || || |||||||| | ||| | |||| Sbjct 149441 TGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATA 149500 Query 47627 TATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNN 47686 || |||||||| |||| | |||| | |||||| |||| |||||| Sbjct 149501 AATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGATGGCG 149560 Query 47687 NNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTT 47746 || | |||||||| ||||| || || ||||| || || | || | Sbjct 149561 CATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGCGCAT 149620 Query 47747 ATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANN 47806 |||||| || ||||| || | ||||| | ||| ||||| || ||||| || ||| Sbjct 149621 ATTAGATCGCTTTGCTTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTTCAGATT 149680 Query 47807 NNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATT---TAT 47863 | | || ||| || ||||| | | || | | Sbjct 149681 CCGAGTAACAGTTTTGGCTACCTCCTTTAGCTTCGCGAAATCGTATGTACGATCGGGTTT 149740 Query 47864 AACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCAT--TTGGATTA 47921 |||||| | || || || || || || |||||||| ||||| | |||| || || | Sbjct 149741 TACAAACATGTTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTCATCTTTTGAAGA 149800 Query 47922 GTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGA 47981 |||| | | ||||| | || || || ||| ||||| || || | ||||| || Sbjct 149801 GTAT--TCCACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGG 149858 Query 47982 TTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGA 48041 ||| | || || || || ||||| ||||| |||| |||||| || | ||| Sbjct 149859 TTACTCTTTCGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGC 149918 Query 48042 GATTCAATGATAGATTTCCAAACAGTCCTA-GCCTTTATAACAGCTCTAGCTTTATTA-- 48098 || || ||||| | ||| | | || | ||||| ||| || | || | | Sbjct 149919 GACTCTATGATGGCGAACCACAAA-TCTTGCGCCTT---AAC--CTGTCGCGTGAAACGA 149972 Query 48099 ---TCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACAT-TATCTAA 48154 || | ||||| ||| || | || | || || || || ||| | || | Sbjct 149973 CCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTGGAACTCCTCACCC----CATGTCTCCGA 150028 Query 48155 C---CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGT 48211 | |||||||| || | || ||||| || ||| || | || || | Sbjct 150029 CAAACCAGGACAATCGTGGGGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTG 150088 Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATT 48271 ||| || | ||| || ||||| ||||| || | || |||| | | ||||| || Sbjct 150089 CATGAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTT 150148 Query 48272 GCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331 || | ||| ||||||| || | ||| || | |||||| |||||||||| || ||||| Sbjct 150149 TCCCGTGTTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATA 150208 Query 48332 TATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTT 48391 || || | | | || ||||| || ||||| || || || | || | || |||||||| Sbjct 150209 AATAGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTT 150268 Query 48392 ATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACT 48451 || || | | ||| || || | || || ||||||||||| ||||| | ||||| | Sbjct 150269 GTAGACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCCTGCTATATATGT 150328 Query 48452 TCCACTAGCTCT--TATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATT 48509 ||| ||||||| || | | | ||| || |||||| ||||| ||| |||||| || Sbjct 150329 TCCTTTAGCTCTAATACAATGCACATT--AAGACCTATGCCACCGGCCGATTTAGAGATC 150386 Query 48510 AGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569 | |||||| |||| || ||||| |||||||| || || ||||| || ||| | | Sbjct 150387 AATGCACACTGTTTGAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTCAGC 150446 Query 48570 AGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCA 48629 || || || |||| ||| || | |||| ||| | ||| | ||||| || || Sbjct 150447 AGGAAGCAGGACGACAGTTGTGGTCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAGGCG 150506 Query 48630 TGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCAT 48689 || |||| || ||| || | ||| || || || ||||| ||| ||| || || Sbjct 150507 TGCGTAAAGTATCGCTCAGACAGCAAGTTGTACGTCTCAATTGCAGCATCAATGTCTGCA 150566 Query 48690 TGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTA 48749 |||||| || |||| |||||||| | ||| | ||| || | ||| ||||| || Sbjct 150567 CCATGTATGCCGATAGCAACACGCATGAGCATGTGTTGTGGCCGTTCTACAATCTTCCCT 150626 Query 48750 TTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAG 48809 || |||||||| || |||||| |||| |||||||| ||||| ||||| ||||| |||| Sbjct 150627 TTAATTTTCAACAGGTATGATCTTTCTAATGTTTTGAAACCGAAATAATTGTAACCAAAG 150686 Query 48810 TC 48811 || Sbjct 150687 TC 150688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107387701640