Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 289 3e-73
>seq1
Length=37976048
Score = 289 bits (320), Expect = 3e-73
Identities = 1183/1862 (64%), Gaps = 40/1862 (2%)
Strand=Plus/Plus
Query 46973 tttttCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032
||| || || ||||||| ||| | |||| || | || || |||||||||||||| ||
Sbjct 148844 TTTGTCAACGGTAAACTGAATCGCATTAACAGCCGGCTTCGTGCGTAAATAATACATCCC 148903
Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092
|| || | || | |||| || |||||||| || |||| |||| || | ||
Sbjct 148904 TGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGG 148963
Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152
|| | | |||||||| | ||| || |||||||||||||| |||| ||| || ||
Sbjct 148964 CTCAGCTACGTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGC 149023
Query 47153 CATATCTAAAATAACCCTTTG-TGGTATCTCCCATACTGTTTTATAAAT-TTGTTTAATG 47210
||| | ||| || || || ||| ||||| || ||||| || | ||| || ||
Sbjct 149024 CATTT-TAATGCAAGTTTTCACTGATATTTCCCAGACCGTTTTGTACAGATTGCGTA-TG 149081
Query 47211 TCTTCTGGGAGAT----TAGTATTTTGAATAGATCCTCCgttttctataattttgttttt 47266
| || || | | || ||||||| || ||||| || | | || ||||||||
Sbjct 149082 TGTTGCGGAATTTCCTCTA-TATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTT 149140
Query 47267 taattcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAAT 47326
| ||||| ||| || | ||||| | |||| | |||| |||| || |
Sbjct 149141 CATTTCATCATCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACCAC 149200
Query 47327 TTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGA 47386
|||||||||||| || || || |||||| | || | || ||| || ||||| | |||
Sbjct 149201 TTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGA 149260
Query 47387 TTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCT 47446
|| || || || | ||||| ||||| || || || ||||| | || | || |
Sbjct 149261 CTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAGCGA 149320
Query 47447 ATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGA 47506
||| | | || || | || | ||||| ||| | ||||
Sbjct 149321 ATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATTCTGT 149380
Query 47507 TGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATA 47566
|| | ||| | ||| ||||||||||||||| | || | ||| |||| |||
Sbjct 149381 GGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCATCATA 149440
Query 47567 TGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATA 47626
||||| || ||||| | || ||| | || || |||||||| | ||| | ||||
Sbjct 149441 TGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATA 149500
Query 47627 TATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNN 47686
|| |||||||| |||| | |||| | |||||| |||| ||||||
Sbjct 149501 AATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGATGGCG 149560
Query 47687 NNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTT 47746
|| | |||||||| ||||| || || ||||| || || | || |
Sbjct 149561 CATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGCGCAT 149620
Query 47747 ATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANN 47806
|||||| || ||||| || | ||||| | ||| ||||| || ||||| || |||
Sbjct 149621 ATTAGATCGCTTTGCTTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTTCAGATT 149680
Query 47807 NNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATT---TAT 47863
| | || ||| || ||||| | | || | |
Sbjct 149681 CCGAGTAACAGTTTTGGCTACCTCCTTTAGCTTCGCGAAATCGTATGTACGATCGGGTTT 149740
Query 47864 AACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCAT--TTGGATTA 47921
|||||| | || || || || || || |||||||| ||||| | |||| || || |
Sbjct 149741 TACAAACATGTTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTCATCTTTTGAAGA 149800
Query 47922 GTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGA 47981
|||| | | ||||| | || || || ||| ||||| || || | ||||| ||
Sbjct 149801 GTAT--TCCACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGG 149858
Query 47982 TTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGA 48041
||| | || || || || ||||| ||||| |||| |||||| || | |||
Sbjct 149859 TTACTCTTTCGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGC 149918
Query 48042 GATTCAATGATAGATTTCCAAACAGTCCTA-GCCTTTATAACAGCTCTAGCTTTATTA-- 48098
|| || ||||| | ||| | | || | ||||| ||| || | || | |
Sbjct 149919 GACTCTATGATGGCGAACCACAAA-TCTTGCGCCTT---AAC--CTGTCGCGTGAAACGA 149972
Query 48099 ---TCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACAT-TATCTAA 48154
|| | ||||| ||| || | || | || || || || ||| | || |
Sbjct 149973 CCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTGGAACTCCTCACCC----CATGTCTCCGA 150028
Query 48155 C---CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGT 48211
| |||||||| || | || ||||| || ||| || | || || |
Sbjct 150029 CAAACCAGGACAATCGTGGGGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTG 150088
Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATT 48271
||| || | ||| || ||||| ||||| || | || |||| | | ||||| ||
Sbjct 150089 CATGAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTT 150148
Query 48272 GCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331
|| | ||| ||||||| || | ||| || | |||||| |||||||||| || |||||
Sbjct 150149 TCCCGTGTTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATA 150208
Query 48332 TATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTT 48391
|| || | | | || ||||| || ||||| || || || | || | || ||||||||
Sbjct 150209 AATAGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTT 150268
Query 48392 ATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACT 48451
|| || | | ||| || || | || || ||||||||||| ||||| | ||||| |
Sbjct 150269 GTAGACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCCTGCTATATATGT 150328
Query 48452 TCCACTAGCTCT--TATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATT 48509
||| ||||||| || | | | ||| || |||||| ||||| ||| |||||| ||
Sbjct 150329 TCCTTTAGCTCTAATACAATGCACATT--AAGACCTATGCCACCGGCCGATTTAGAGATC 150386
Query 48510 AGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569
| |||||| |||| || ||||| |||||||| || || ||||| || ||| | |
Sbjct 150387 AATGCACACTGTTTGAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTCAGC 150446
Query 48570 AGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCA 48629
|| || || |||| ||| || | |||| ||| | ||| | ||||| || ||
Sbjct 150447 AGGAAGCAGGACGACAGTTGTGGTCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAGGCG 150506
Query 48630 TGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCAT 48689
|| |||| || ||| || | ||| || || || ||||| ||| ||| || ||
Sbjct 150507 TGCGTAAAGTATCGCTCAGACAGCAAGTTGTACGTCTCAATTGCAGCATCAATGTCTGCA 150566
Query 48690 TGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTA 48749
|||||| || |||| |||||||| | ||| | ||| || | ||| ||||| ||
Sbjct 150567 CCATGTATGCCGATAGCAACACGCATGAGCATGTGTTGTGGCCGTTCTACAATCTTCCCT 150626
Query 48750 TTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAG 48809
|| |||||||| || |||||| |||| |||||||| ||||| ||||| ||||| ||||
Sbjct 150627 TTAATTTTCAACAGGTATGATCTTTCTAATGTTTTGAAACCGAAATAATTGTAACCAAAG 150686
Query 48810 TC 48811
||
Sbjct 150687 TC 150688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562107387701640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |