Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq3 226 2e-53
seq4 122 7e-22
seq2 102 7e-16
>seq3
Length=33601328
Score = 226 bits (250), Expect = 2e-53
Identities = 559/837 (67%), Gaps = 16/837 (2%)
Strand=Plus/Minus
Query 551782 CTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGT 551841
||||| || ||| | ||| | || || |||||||| ||||| || |||| ||| |
Sbjct 573095 CTACTGCAGGCGATACACATTTGGGAGGAGAAGATTTCGATAACCGAATGGTTTCACATT 573036
Query 551842 GTGTTGAAGATTTTAAACGAAAAAACAA--AGTTGATCT--ATCTACATCTGCCAAAGCT 551897
||| ||||| |||||||| || || || || |||| | | ||| | |||
Sbjct 573035 TTGTGGAAGAGTTTAAACGTAAGAATAAGAAGGACATCTCGACCAACAAGCG----AGCA 572980
Query 551898 CTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAA 551957
| ||||||||| | || || |||||| |||| || || || | ||| | || ||
Sbjct 572979 TTGCGTCGTCTACGTACGGCATGCGAACGAGCGAAGCGCACTTTGTCAGCATCAACCCAG 572920
Query 551958 ACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGG 552017
| | |||||| | ||||| | || || || ||||||| |||| |||| |||||
Sbjct 572919 GCAAGCATTGAAATCGATTCGCTTTTCGAAGGGATTGATTTCTATACTTCTATAACGAGG 572860
Query 552018 GCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAA 552077
|| |||||||| | || ||| | || | | ||||| || ||||| | ||
Sbjct 572859 GCACGTTTTGAAGAACTCAACTCAGATTTGTTCCGCGACACAATGGAGCCAGTGGCTAAA 572800
Query 552078 GTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGA 552137
| ||| ||||| | ||||| |||||| || |||| || || || | |||||||||
Sbjct 572799 GCATTACGAGATGCCAAGATGGATAAAGGTAATATACACGATATAGTTTTGGTTGGTGGA 572740
Query 552138 TCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAAAAT 552195
|| || | ||||| ||| | | |||| | | || || ||| ||||| ||| | |
Sbjct 572739 TCCACTCGGATTCCGAAAGTACA-GAAACTTCTGCAGGATTTCTTT-AATGGGAAAGAGT 572682
Query 552196 TAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTA 552255
| || || | || || || || ||||| || ||||| || ||| | ||||| || |
Sbjct 572681 TGAACAAATCCATCAACCCCGACGAAGCTGTCGCATATGGCGCTGCAGTGCAAGCGGCAA 572622
Query 552256 TTCTTTCT-GGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCT 552314
| ||| | ||| | || || | || || | | | | |||||||| ||
Sbjct 572621 T-CTTACAAGGAGACACATCGGAGGCGGTGCAGGATTTACTTTTGCTGGATGTTACACCA 572563
Query 552315 CTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACT 552374
|| || | || | ||||| | ||||| | ||||| ||| ||| | |||||||
Sbjct 572562 CTGTCGTTAGGAATCGAAACGGCCGGAGGAGTCATGACCGTTCTGATCAAGCGAAATACC 572503
Query 552375 ACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTT 552434
||||| || || || | | ||| |||| || || || |||||| ||| |||
Sbjct 572502 ACTATACCGACGAAGCAAACCCAAACATTCACTACATACTCGGACAATCAACCTGGGGTT 572443
Query 552435 ACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACT 552494
||||||| | |||||||||||| | | || ||||| || |||| |||||||
Sbjct 572442 CTAATTCAAGTATTTGAAGGAGAACGCGCTATGACGAAAGACAACAATCTTCTTGGTAAA 572383
Query 552495 TTT-AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553
||| || | || |||||||| || ||||| |||||||||||||| ||||| || || ||
Sbjct 572382 TTTGAACTCAGT-GGTATTCCACCCGCTCCACGTGGAGTACCGCAGATTGAGGTCACATT 572324
Query 552554 CGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAA 552610
|||||| ||||| || || || ||||||| ||||| ||| ||||| | |||||
Sbjct 572323 CGATATTGATGCTAACGGTATCATGAATGTATCTGCTATTGAGAAATCGACTAACAA 572267
Score = 141 bits (156), Expect = 7e-28
Identities = 273/400 (68%), Gaps = 16/400 (4%)
Strand=Plus/Minus
Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240
||||| ||||| || || || | | ||||||||| | | || ||| |||||||||
Sbjct 573552 GATGCGAAACGGTTGATCGGCCGTAAGTTTAATGATCCAGCGGTCCAGAGTGATATGAAG 573493
Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATG-- 550298
|| ||||| ||| || |||| | || |||| ||||| |||||||| ||
Sbjct 573492 CACTGGCCGTTCGAAGTTGTAAGTGACGCTGGTAAACC-------GAAGCTACAAGTGGA 573440
Query 550299 ----AAGGATCTGTT-AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353
|||| | ||| |||| |||||| || | ||||| ||||| | | ||
Sbjct 573439 ATACAAGGGCGAGAAGAAATCGTTTTTTCCAGAAGAAGTCTCATCAATGGTGCTTACTAA 573380
Query 550354 AATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTG 550412
|||||| |||| || |||| |||| ||||| || | |||| || ||||| |
Sbjct 573379 AATGAAGGAAACTGCTGAAGCTTACCTTGGA-AAGAATATTGCAAATGCGGTTATAACAG 573321
Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472
|||| || || |||||||| || || ||||| || || || ||||| || |||||||
Sbjct 573320 TACCTGCGTACTTTAATGATTCTCAGCGTCAGGCCACAAAGGATGCAGGTGCAATTGCTG 573261
Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532
| | ||||| | ||||| ||||||||||| || ||||||||| ||||||| || | |
Sbjct 573260 GTTTAAATGTGTTGCGTATCATCAATGAACCGACAGCTGCTGCAATTGCATACGGGTTGG 573201
Query 550533 ATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGA 550572
| ||| || | ||| | ||||| || ||||||||
Sbjct 573200 ACAAAACAGGTGTTGGAGAGCGGAATGTTCTTATCTTTGA 573161
Score = 104 bits (114), Expect = 2e-16
Identities = 138/187 (74%), Gaps = 6/187 (3%)
Strand=Plus/Minus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
|| || ||||| || || || ||| ||||| || || | || |||| || |||||
Sbjct 573814 GGCATTGATTTGGGGACGACGTATTCGTGTGTAGGAGTGTTCCAGCATGGAAAGGTTGAT 573755
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
||||| || ||||||||||| || |||| || |||||||| || | || || || ||
Sbjct 573754 ATTATCGCGAATGATCAAGGCAATCGAACCACACCATCTTACGTGGCGTTTACCGATACC 573695
Query 550118 GAAC-ATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACT 550174
|| | | ||| ||||||||||||| ||| |||||| || || ||||| | ||||||
Sbjct 573694 GAGCGACTTA-TTGGTGATGCAGCCAAAAATCAAGTAGCAATG--AATCCAAATAATACT 573638
Query 550175 ATTTTTG 550181
|||||||
Sbjct 573637 ATTTTTG 573631
>seq4
Length=34682002
Score = 122 bits (134), Expect = 7e-22
Identities = 126/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 930666 GATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCATT 930725
|||||||||||||| || || || ||||||||||| ||||||| ||||| || || ||
Sbjct 32678011 GATTTTTCTTCACCCAACATCGCAAAAGAAATGCACGTTGGACACTTGCGATCCACTATA 32677952
Query 930726 ATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTCAAT 930785
|||||||| || | || ||||| ||| | || || | | |||| ||| |||||
Sbjct 32677951 ATTGGAGATTCAATTTGCAGATTTCTTGAGTTTTTAGGGTTTGATGTTCTACGAATCAAT 32677892
Query 930786 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTAT 930830
||||| || || ||||||||||| ||||||||| | || ||| ||
Sbjct 32677891 CATATCGGAGACTGGGGAACACAGTTTGGTATGCTTATCGCTCAT 32677847
>seq2
Length=51801758
Score = 102 bits (112), Expect = 7e-16
Identities = 179/258 (69%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
||||| ||| | ||||| || || || || ||||| || | || |||| || ||||||
Sbjct 30116517 GGTATTGATCTGGGAACGACCTACAGCTGCGTTGGAGTGTTTCAGCATGGCAAGGTTGAA 30116576
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
||||||||||| || || || ||| | || || || || || ||| | ||||| || ||
Sbjct 30116577 ATTATTGCCAACGACCAGGGCAACCGCACGACCCCGTCCTACGTTGCCTTCACCGACACC 30116636
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATACT 550174
|| | | | | |||||||| || || | || |||| || || || ||||| ||
Sbjct 30116637 GAGCGTCTGATCGGTGATGCTGCCAAGAACCAGGTGGCCA-TG--AACCCGACCAACACA 30116693
Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234
|| || || || || || || || ||| | | || | ||| | | | ||||| ||
Sbjct 30116694 ATCTTCGACGCCAAGCGATTGATCGGACGCAAGTTCGACGATCCTGCCATCCAGGCCGAC 30116753
Query 550235 ATGAAGCATTGGCCTTTC 550252
|||||||| ||||| |||
Sbjct 30116754 ATGAAGCACTGGCCGTTC 30116771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029285370213490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |