Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 2e-22
seq2 95.1 1e-14
seq1 84.2 2e-11
>seq3
Length=33601328
Score = 120 bits (132), Expect = 2e-22
Identities = 197/284 (69%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 13651 ATTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCG 13710
|| ||| |||||||| || ||||| | ||||||| || || || || | ||| ||
Sbjct 31445968 ATCGAACTTTCGTTTGCATCCTTCGTAGTTCATGTAGCGGATCTTGCCGAAAATTTCGCG 31446027
Query 13711 CTCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTT 13770
|||| |||| | |||| || | || || |||||||||||||| | || |||||
Sbjct 31446028 CTCCTTCCAACCCTGATCATGGATGCCAGCGATCGACCACATGCAACCAACGTACCCGTT 31446087
Query 13771 GGGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGGCGTTGATTAAAGCCAC 13830
|||||||| || ||||| ||||| ||||||| || || ||| | | ||| |
Sbjct 31446088 CGGATCGCGCCCGTCCAAGCTGTAGCGATCGTTGAGGTAGATAGCGGTCTCGAGCGCCTC 31446147
Query 13831 TGTAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCCGTG 13890
| ||||| ||| ||| || | ||||| || ||||| || || | || | |||||||
Sbjct 31446148 TTCCGGCGATTTAGTCCACTCGAGGATTTTCTTCGCCCAGTACATGCGCAGAAATCCGTG 31446207
Query 13891 CATTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACA 13934
||| ||||||| | | | |||| ||| || | ||||||||
Sbjct 31446208 CATCTTGCCTTCCTTCACCATCTGTAGCTGGGCCGAGTTCCACA 31446251
>seq2
Length=51801758
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| || | | ||||| || || || || ||||| || || || || ||||| ||||
Sbjct 21000375 TTCCACCACGCAGACGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGG 21000434
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| || | |||| |||| ||||| || || || || | |||||| ||||| || |
Sbjct 21000435 ACAGCGTGCGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGG 21000494
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
|||||||||| || || ||||| ||| || || | || | || || || | || |
Sbjct 21000495 GAATGCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGCTCGA 21000554
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
| || ||||||| || || || || | || || || || |||||||||
Sbjct 21000555 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATG 21000604
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || ||||| || || || || || || ||||||| | || | | || |||
Sbjct 36664900 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCCTCC 36664841
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || ||||||||||| ||||| || |||||||| || || || ||
Sbjct 36664840 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 36664781
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | || || || | ||||| || ||||||| || |||
Sbjct 36664780 ATCTTGGCCTTCACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTCTTG 36664721
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || || || || || ||||||||
Sbjct 36664720 CCAGTCAAGGTCTTCACGAAGATCTGCAT 36664692
>seq1
Length=37976048
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| || || || || || || ||||| |||| | || | | || |||| |||
Sbjct 21735285 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTCTTCCAGCTGC 21735344
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || || | |||||| ||||| ||||||||||| || || || || || ||
Sbjct 21735345 TTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTCCTGGATCTTG 21735404
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | || || || | || || ||||| |||| || || || ||
Sbjct 21735405 GCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTG 21735464
Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472
| ||||| || || |||||||| ||
Sbjct 21735465 AGGGTTTTGACGAAGATCTGCATCGT 21735490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396277429241757
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |