Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 >seq2 Length=51801758 Score = 111 bits (122), Expect = 2e-19 Identities = 479/740 (65%), Gaps = 22/740 (3%) Strand=Plus/Minus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081 || ||| |||||| ||| || || || ||||| || || | | |||| || ||| || Sbjct 4901857 CAAATCTTCGTCGGAAAATCCGGTTCCAATCTTGCAGATCGTCTGGTACTCCTCGTTATC 4901798 Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCC--ACCCCG 197139 | || ||| || ||||| | ||| |||||||||| || |||| || ||| ||| || Sbjct 4901797 AGCATCGTAGCAAGCGAGCAGGAACCCGCCGTAGGTACCGGTTCGTTTGCCCTTACCGCG 4901738 Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199 | | || ||||| || |||| ||| || | |||| ||| || || || || || Sbjct 4901737 AT--ACCCGCCGATGACGACCAAATCGAGCGAATCGCCCACACCGGTCAGATAGTCCTTT 4901680 Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGG 197259 |||||||| | |||| | | |||| || || || ||||||||||| | | ||| Sbjct 4901679 TTCAGTTTCAACCAGTTACGCGATCGTTTCGCGATTTCGTAGGTTGCATCGCGCTGCAGC 4901620 Query 197260 GTCTTGATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAAGTTTGAATG 197319 || || | ||||| ||| ||||| | | | || |||| | || ||| || | Sbjct 4901619 GTTTTCACCATCAGTCCTTCGCAGTTTCCACGAACTGCCTCATCCAGGAAGCGCTGTAAC 4901560 Query 197320 TCTTCCGGTTTGTTAGACATCATATCTCG-CGCGAAGATAAATTGTCCCTCCACCTCCGT 197378 || ||| | | | ||| || || || | | | || || || | ||| Sbjct 4901559 TCATCCAGATCCCCCG-TATCCAGTCGCGTTGCATATTTCCACTGGCCTTCGATCTCACG 4901501 Query 197379 AAAACAACTCCTCATAAGTTCCCTCCTCTCTCTGAA-GCTCTTGTTGACCTGAGACACTC 197437 ||| || || || || | | ||| ||||| | | | | || | | | || Sbjct 4901500 GAAATGGCTGTACAACAGCTCGCGGCGCTCGCTGAACGGACGT-TCAACGAGGGGCTGTC 4901442 Query 197438 CGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCCT 197497 | |||| ||||| | || || || ||||||||||| || | || || |||| | Sbjct 4901441 CATTCAGGTACAGTAGATCGAACATGAACACGCACACCTGCACCTTGATGTCCGCTTCAT 4901382 Query 197498 TGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTCAA 197557 | |||| || || |||| || || | || |||||||| |||||| | ||||||| Sbjct 4901381 TCGCATCCTTGCGCTTTCGCGTGCTCAACACCTGGAAGGGAAGAATCTGCCTTTTCTCAA 4901322 Query 197558 CGTCCCAAGCAACTGCCTCAGCGTCCAAGATGAAAGACTTCACTCCCTCGTTGATCG--- 197614 | ||||| ||||| ||||| |||| || | ||| || || ||| || Sbjct 4901321 CATCCCAGGCAACCGCCTCGCAATCCAGTATCGCACTCTTGACCGTGTCCTTGCGCGTAA 4901262 Query 197615 ATTGGGGAAGCCTATTGATTATGTCGGGGTACTT-CTCGGTGTTATTTTCAGAGTTGCGG 197673 | | | |||| | ||| | ||||||||||| ||| ||||| || || |||||| Sbjct 4901261 ACTCG---AGCCGACCGATCACATCGGGGTACTTGCTC-GTGTTGTTCTCCTGATTGCGG 4901206 Query 197674 CTAAAAATTCTAATCTTCCCTCCCTCC-AT-GTAG-TGAATCTGAGCCCTCTCTCCGTCA 197730 || |||| ||| || || || ||| || | || ||||||||||| | ||| ||||| Sbjct 4901205 CTGAAAA-TCTGCACT--CCCCCATCCGATAGCAGATGAATCTGAGCTCGCTCGCCGTCG 4901149 Query 197731 TACTTGTACTCGCAAGAAAA 197750 ||||| ||||||| | ||| Sbjct 4901148 TACTTCCACTCGCATGTAAA 4901129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676727899716880