Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1 197 1e-45
seq2 98.7 8e-16
>seq1
Length=37976048
Score = 197 bits (218), Expect = 1e-45
Identities = 232/314 (74%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 8990 ATTAATTAGTACCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAG 9049
|||||||||| || || ||||||||||||||| ||||| | ||| || || || |
Sbjct 946212 ATTAATTAGTGCCCGTGGACCCAAACCCTCCCGAGCCGCGTTCGGTATCGGTAAGCGATG 946271
Query 9050 TAACCTCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCC 9109
| ||| | || ||||||| |||| ||| || || ||||||||||| | || |
Sbjct 946272 GCAATTCTTCTAGCTCGGGATAAGCTATTTTTTCGCAGATGAATTGAGCAATACGATCGC 946331
Query 9110 CCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCC 9169
|||| || || | || || | ||| ||| || |||||||| ||||| ||||| || |
Sbjct 946332 CCTTCTTGACCTCGAAATCGGCCTCGCCATGGTTAAACAGCACAACTCCGACGTTTCCGC 946391
Query 9170 TGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAG 9229
|||||| || || | |||||||| || |||||||| |||| || ||||||||||| |
Sbjct 946392 GGTAATCTTCGTCCACGACACCAGCTCCGACGTCGATAAAGTTTTTCACCGCTAGTCCGG 946451
Query 9230 AGCGGGGCGCGATTCGACCGTAGCATCCCACCGGTAATTGCACCCGCAAGTCGGTCATGA 9289
| || ||||| | || |||||||||||| |||| | |||||| | | ||||||||| |
Sbjct 946452 AACGAGGCGCCACCCGGCCGTAGCATCCCTCCGGAACCTGCACCTGAATGTCGGTCATTA 946511
Query 9290 CCAGCCCCTTGCCG 9303
||||| ||| |||
Sbjct 946512 CCAGCAGCTTACCG 946525
Score = 104 bits (114), Expect = 2e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||| || ||||| ||| || || || ||||| || || || | ||
Sbjct 21735270 AGGCGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGT 21735329
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| |||| |||||| ||||| || || || ||||| ||||||| |||| |||||||
Sbjct 21735330 CCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCC 21735389
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | || || | ||| ||||| | ||
Sbjct 21735390 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTG 21735449
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| || || ||||| | ||||| || || ||||||||||||
Sbjct 21735450 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCGTG 21735491
>seq2
Length=51801758
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || ||||| ||| || || || ||||| || || || | ||| | || |||
Sbjct 21000395 ACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGACCATCCTCC 21000454
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| || || || || || ||||| ||||| | ||||| ||| |||||||| |
Sbjct 21000455 AGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGA 21000514
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
|||||| || || | | | || || | ||| ||||||| || || || |||
Sbjct 21000515 ATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGCTCGACCTCCAGAGTGATGGTCTTT 21000574
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| || || || |||||||||||
Sbjct 21000575 CCTGTCAGGGTCTTCACGAAAATCTGCAT 21000603
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || || ||| || || || || ||||| || || | || |||| |||
Sbjct 36664900 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCCTCC 36664841
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| ||||| || |||| ||||| ||||| | |||| ||||||||||||
Sbjct 36664840 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 36664781
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | | || || | ||||||||||| || || || ||
Sbjct 36664780 ATCTTGGCCTTCACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTCTTG 36664721
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| || || || || ||||||||
Sbjct 36664720 CCAGTCAAGGTCTTCACGAAGATCTGCAT 36664692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936666821923
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |