Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1 197 1e-45 seq2 98.7 8e-16 >seq1 Length=37976048 Score = 197 bits (218), Expect = 1e-45 Identities = 232/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 8990 ATTAATTAGTACCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAG 9049 |||||||||| || || ||||||||||||||| ||||| | ||| || || || | Sbjct 946212 ATTAATTAGTGCCCGTGGACCCAAACCCTCCCGAGCCGCGTTCGGTATCGGTAAGCGATG 946271 Query 9050 TAACCTCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCC 9109 | ||| | || ||||||| |||| ||| || || ||||||||||| | || | Sbjct 946272 GCAATTCTTCTAGCTCGGGATAAGCTATTTTTTCGCAGATGAATTGAGCAATACGATCGC 946331 Query 9110 CCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCC 9169 |||| || || | || || | ||| ||| || |||||||| ||||| ||||| || | Sbjct 946332 CCTTCTTGACCTCGAAATCGGCCTCGCCATGGTTAAACAGCACAACTCCGACGTTTCCGC 946391 Query 9170 TGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAG 9229 |||||| || || | |||||||| || |||||||| |||| || ||||||||||| | Sbjct 946392 GGTAATCTTCGTCCACGACACCAGCTCCGACGTCGATAAAGTTTTTCACCGCTAGTCCGG 946451 Query 9230 AGCGGGGCGCGATTCGACCGTAGCATCCCACCGGTAATTGCACCCGCAAGTCGGTCATGA 9289 | || ||||| | || |||||||||||| |||| | |||||| | | ||||||||| | Sbjct 946452 AACGAGGCGCCACCCGGCCGTAGCATCCCTCCGGAACCTGCACCTGAATGTCGGTCATTA 946511 Query 9290 CCAGCCCCTTGCCG 9303 ||||| ||| ||| Sbjct 946512 CCAGCAGCTTACCG 946525 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || ||||| ||| || || || ||||| || || || | || Sbjct 21735270 AGGCGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGT 21735329 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| |||||| ||||| || || || ||||| ||||||| |||| ||||||| Sbjct 21735330 CCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCC 21735389 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||| ||||| | || Sbjct 21735390 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTG 21735449 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || || ||||| | ||||| || || |||||||||||| Sbjct 21735450 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCGTG 21735491 >seq2 Length=51801758 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || ||||| ||| || || || ||||| || || || | ||| | || ||| Sbjct 21000395 ACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGACCATCCTCC 21000454 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || || || ||||| ||||| | ||||| ||| |||||||| | Sbjct 21000455 AGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGA 21000514 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| || || | | | || || | ||| ||||||| || || || ||| Sbjct 21000515 ATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGCTCGACCTCCAGAGTGATGGTCTTT 21000574 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| || || || ||||||||||| Sbjct 21000575 CCTGTCAGGGTCTTCACGAAAATCTGCAT 21000603 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || || || || ||||| || || | || |||| ||| Sbjct 36664900 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCCTCC 36664841 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || |||| ||||| ||||| | |||| |||||||||||| Sbjct 36664840 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 36664781 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || | ||||||||||| || || || || Sbjct 36664780 ATCTTGGCCTTCACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTCTTG 36664721 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || || || |||||||| Sbjct 36664720 CCAGTCAAGGTCTTCACGAAGATCTGCAT 36664692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936666821923