Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 1e-24
seq1 105 1e-17
>seq3
Length=33601328
Score = 129 bits (142), Expect = 1e-24
Identities = 289/428 (68%), Gaps = 7/428 (2%)
Strand=Plus/Minus
Query 47941 GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGAT 48000
||||| || ||||||| ||||||| || |||||||||| | |||||||| |
Sbjct 22123662 GCCCAGCTCCACCAGCAGCCGATCCGCCACAAACTCGATGTACTGGGACATGAGTTCGCA 22123603
Query 48001 GTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCA- 48059
|||||||| | | || |||| || || || || ||||||| ||| || ||||
Sbjct 22123602 ATTCATGCCCAACATATCGACTGGCAGTGCTTTGGTCAGGAACTCCTGCTCGAT-TGCAA 22123544
Query 48060 CGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGG 48119
| || |||| | ||| | | | || || || || || | ||| | ||||
Sbjct 22123543 CCGCATCCCGGATAATGTCCGTCACACGCTTGCGCGATGGCTTCTGTATCAGATACTTGA 22123484
Query 48120 -CATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTG 48178
||| ||| ||||||||||| | ||||| ||||| || || ||| | | | |||
Sbjct 22123483 ACAT-GAGA---CAGGCAAAGTCGCAATGCAAACCTTCATCGCGCGAGATCAACTCATTG 22123428
Query 48179 GAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAG 48238
||||| | ||| ||||| | || | || || |||||||| || ||||| || |
Sbjct 22123427 GAGAACGTCAAACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTG 22123368
Query 48239 CCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCG 48298
|| ||||||||||||||| || || |||||||| || | ||| ||| | ||
Sbjct 22123367 CCGCTGAAGAAGATGCCCTCGACAGCTGCGAACGCCACGATACGCTCGCCGTAGTTGGCC 22123308
Query 48299 TTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTC 48358
|||||| ||||||||| | ||||||||| ||||| ||| | || |||| ||||
Sbjct 22123307 TTCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACACACGGCAGCGTC 22123248
Query 48359 TCTATGGC 48366
|| |||||
Sbjct 22123247 TCGATGGC 22123240
Score = 98.7 bits (108), Expect = 2e-15
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
||||||||| |||||| || || |||||||||||||| || ||||| | |||||
Sbjct 22123112 GTACATCTCGCTGTGCACGTTTTCCATAGCGATCTGGAAACCATAGAAACAGCGAGCCTC 22123053
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
|||||| || || | ||| | || | |||||| || || || || ||||| ||
Sbjct 22123052 CGTCACCTGAACCTCCTGGCTGAACCGTTCGACCAGATTTTCGTTCACGATACCATCGGA 22122993
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
|| ||||||||||| || ||||| | || || |||||| | | | || ||||
Sbjct 22122992 GGCGGCAAAGAAGGCGAGCACATGCGAGATAAAGTGACGCTCGCTCGGCTTCAGCGCATC 22122933
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
|||| | | | ||| || || || || ||||| || |||||||| || ||
Sbjct 22122932 CCAGTCTTTCATGTCCTTAGATAGATCGACCTCTTCGACCGTCCAGAAAGAAGC 22122879
>seq1
Length=37976048
Score = 105 bits (116), Expect = 1e-17
Identities = 440/680 (65%), Gaps = 22/680 (3%)
Strand=Plus/Plus
Query 213530 GTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589
||| |||| || |||||||||||||| || ||| || || | ||| || |||||
Sbjct 149801 GTATTCCACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTT 149860
Query 213590 TGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGG 213648
|||| || | ||| | ||| |||||||||||||| || || ||||| | ||| |
Sbjct 149861 ACTCTTT-CGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCG 149919
Query 213649 ACACCAGTATCTGGCTCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGC 213707
|| | | || | ||| | | | || ||||| ||| ||| ||| | || |
Sbjct 149920 ACTCTATGATGGCGAACCACAAAT-CTTGCGCCTTAACCTGTCGCGTGAAA----CGACC 149974
Query 213708 GTAGC-CTCGTA--CTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAG 213763
| || |||||| | || |||||| | | ||| || | ||||| | | | | | |
Sbjct 149975 CTCGCGCTCGTAGCCAGT--GTAGAGTTTTTGGAACTCCTCACCCCATGTCTCCGACAAA 150032
Query 213764 TCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCAT 213823
|| ||||| ||| ||||| | ||||| ||| || ||| | ||||||
Sbjct 150033 -CCAGGACAATCGTGGGGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTGCAT 150091
Query 213824 GAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCC 213883
||||| || || | |||||| ||| ||||| ||| || | | ||| || |||
Sbjct 150092 GAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCC 150151
Query 213884 AGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGAT 213943
| ||| || || || | ||| ||||| || ||| | ||||| ||||||| || ||
Sbjct 150152 CGTGTTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATAAAT 150211
Query 213944 GGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAA 214000
||||| || || || | |||| || ||||||||||| | || ||||| |
Sbjct 150212 AGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTTGTA 150271
Query 214001 GATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCC 214060
|| ||||| | ||||| | ||||||||| || || ||||| |||||||| | ||
Sbjct 150272 GACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCCTGCTATATATGTTCC 150331
Query 214061 GGAGGCCCT--CAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATG 214118
|| || | ||| ||| ||| |||||||||||||| | || |||||||
Sbjct 150332 TTTAGCTCTAATACAATGCACATTAAGA--CCTATGCCACCGGCCGATTTAGAGATCAAT 150389
Query 214119 GCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAG 214178
|| || | | | ||| || || || | ||||| || || | | |||||| |
Sbjct 150390 GCACACTGTTTGAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTCAGCAGG 150449
Query 214179 AAGCAGCTCGAGAGCTgggg 214198
|||||| ||| || || ||
Sbjct 150450 AAGCAGGACGACAGTTGTGG 150469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931530459523840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |