Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 2e-22
seq1 116 7e-21
>seq3
Length=33601328
Score = 122 bits (134), Expect = 2e-22
Identities = 164/226 (73%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATCCA 25570
|||||| | ||||||| | ||||| | ||||||||| | | |||| | || || | |
Sbjct 22122887 CTGGACGGTCGAAGAGGTCGATCTATCTAAGGACATGAAAGACTGGGATGCGCTGAAGCC 22122946
Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630
|| ||||| || ||| || | | ||| | || |||||||| ||||| |||||||| |
Sbjct 22122947 GAG-CGAGCGTCACTTTATCTCGCATGTGCTCGCCTTCTTTGCCGCCTCCGATGGTATCG 22123005
Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTT 25690
||||||| |||||| ||| | |||| | ||| || ||| |||||| ||||
Sbjct 22123006 TGAACGAAAATCTGGTCGAACGGTTCAGCCAGGAGGTTCAGGTGACGGAGGCTCGCTGTT 22123065
Query 25691 TCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736
|||| ||||||||||| || || ||||| |||||| ||| ||||
Sbjct 22123066 TCTATGGTTTCCAGATCGCTATGGAAAACGTGCACAGCGAGATGTA 22123111
Score = 100 bits (110), Expect = 5e-16
Identities = 171/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845
||||| |||||||||| | || | | ||| | |||||| ||||| |||||
Sbjct 22123231 CTGTTCAATGCCATCGAGACGCTGCCGTGTGTGAAGCGTAAGGCGGACTGGGCGATGAAC 22123290
Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905
|||||| ||| ||| || | | |||||||| | || || || || ||||| |||
Sbjct 22123291 TGGATCTCGAGCAAGAAGGCCAACTACGGCGAGCGTATCGTGGCGTTCGCAGCTGTCGAG 22123350
Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATG 25965
|||||||| |||||||| |||||||||||||||||||| ||| || || |||
Sbjct 22123351 GGCATCTTCTTCAGCGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTGATG 22123410
Query 25966 CCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTT 26025
|| || || || ||||| ||| | ||| | || || ||| | || | || |||
Sbjct 22123411 CCGGGTTTGACGTTCTCCAATGAGTTGATCTCGCGCGATGAAGGTTTGCATTGCGACTTT 22123470
Query 26026 GCCTGCCT 26033
||||| ||
Sbjct 22123471 GCCTGTCT 22123478
>seq1
Length=37976048
Score = 116 bits (128), Expect = 7e-21
Identities = 377/585 (64%), Gaps = 3/585 (1%)
Strand=Plus/Plus
Query 221683 GGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTT 221742
||||| ||||| |||||| || | |||||| |||||||| || | || || ||
Sbjct 149735 GGGTTTTACAAACATGTTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTCATCTTT 149794
Query 221743 GTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATT 221802
| || | | || || || || ||||| |||||||| || || | || |
Sbjct 149795 TGAAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTG 149854
Query 221803 GTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAG 221862
|| ||| ||| |||||| || || ||||||||||| | || | |||||||| |
Sbjct 149855 TTGGTTACTCTTTCGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAAC 149914
Query 221863 CTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACC 221922
||| | | | | || | ||| | ||| || | ||| | | ||| |||
Sbjct 149915 CTGCGACTCTATGATGGCGAACCACAAATCTTGCGCCTTAACCTGTCGCGTGAAACGACC 149974
Query 221923 CTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAG 221982
|||| || | || || || ||||| | | |||| ||||| | | ||| ||
Sbjct 149975 CTCGCGCT---CGTAGCCAGTGTAGAGTTTTTGGAACTCCTCACCCCATGTCTCCGACAA 150031
Query 221983 GCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCAT 222042
|| ||||| | ||| ||||| | |||||| | ||| ||| ||| | ||||||
Sbjct 150032 ACCAGGACAATCGTGGGGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTGCAT 150091
Query 222043 GAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCC 222102
||| | || || |||||||| || | || | ||||| | || ||| || ||
Sbjct 150092 GAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCC 150151
Query 222103 GTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGAC 222162
|||| || | || |||||||||||||| || || | ||||| ||||||| ||| |
Sbjct 150152 CGTGTTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATAAAT 150211
Query 222163 GGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAA 222222
|| | || || ||||||||||| |||||||| ||||| | | | | |||| |
Sbjct 150212 AGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTTGTA 150271
Query 222223 GATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCC 222267
|| || || | ||||| | ||||||||| ||| || || ||
Sbjct 150272 GACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCC 150316
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 221029 TTGTACAGAGCCCTTGTTGACCAAAAGCTCGGTACGCATCTCGTCCGTCCATAGACCCCT 221088
||||| || || |||| | |||| | || | | ||| || || ||| || ||
Sbjct 149105 TTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCATCCCAGAGCTCCAA 149164
Query 221089 CTCTTCCAGCACCTTGACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCT 221148
||| ||| |||| | || || | ||||||||||| || ||||| |||||||||||
Sbjct 149165 CTCAGTCAGATCCTTTAGCAAATGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCT 149224
Query 221149 CCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGC 221208
| | ||| | ||| || ||| ||||||||| |||||||||||| ||||| || ||
Sbjct 149225 ACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGC 149284
Query 221209 CGTGCTGGCGGTGGGCATGGGTGCCACCAGCAG 221241
|| ||||| ||||| || || | |||||
Sbjct 149285 AGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAG 149317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842466277440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |