Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 122 2e-22 seq1 116 7e-21 >seq3 Length=33601328 Score = 122 bits (134), Expect = 2e-22 Identities = 164/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATCCA 25570 |||||| | ||||||| | ||||| | ||||||||| | | |||| | || || | | Sbjct 22122887 CTGGACGGTCGAAGAGGTCGATCTATCTAAGGACATGAAAGACTGGGATGCGCTGAAGCC 22122946 Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630 || ||||| || ||| || | | ||| | || |||||||| ||||| |||||||| | Sbjct 22122947 GAG-CGAGCGTCACTTTATCTCGCATGTGCTCGCCTTCTTTGCCGCCTCCGATGGTATCG 22123005 Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTT 25690 ||||||| |||||| ||| | |||| | ||| || ||| |||||| |||| Sbjct 22123006 TGAACGAAAATCTGGTCGAACGGTTCAGCCAGGAGGTTCAGGTGACGGAGGCTCGCTGTT 22123065 Query 25691 TCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736 |||| ||||||||||| || || ||||| |||||| ||| |||| Sbjct 22123066 TCTATGGTTTCCAGATCGCTATGGAAAACGTGCACAGCGAGATGTA 22123111 Score = 100 bits (110), Expect = 5e-16 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 ||||| |||||||||| | || | | ||| | |||||| ||||| ||||| Sbjct 22123231 CTGTTCAATGCCATCGAGACGCTGCCGTGTGTGAAGCGTAAGGCGGACTGGGCGATGAAC 22123290 Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905 |||||| ||| ||| || | | |||||||| | || || || || ||||| ||| Sbjct 22123291 TGGATCTCGAGCAAGAAGGCCAACTACGGCGAGCGTATCGTGGCGTTCGCAGCTGTCGAG 22123350 Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATG 25965 |||||||| |||||||| |||||||||||||||||||| ||| || || ||| Sbjct 22123351 GGCATCTTCTTCAGCGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTGATG 22123410 Query 25966 CCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTT 26025 || || || || ||||| ||| | ||| | || || ||| | || | || ||| Sbjct 22123411 CCGGGTTTGACGTTCTCCAATGAGTTGATCTCGCGCGATGAAGGTTTGCATTGCGACTTT 22123470 Query 26026 GCCTGCCT 26033 ||||| || Sbjct 22123471 GCCTGTCT 22123478 >seq1 Length=37976048 Score = 116 bits (128), Expect = 7e-21 Identities = 377/585 (64%), Gaps = 3/585 (1%) Strand=Plus/Plus Query 221683 GGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTT 221742 ||||| ||||| |||||| || | |||||| |||||||| || | || || || Sbjct 149735 GGGTTTTACAAACATGTTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTCATCTTT 149794 Query 221743 GTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATT 221802 | || | | || || || || ||||| |||||||| || || | || | Sbjct 149795 TGAAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTG 149854 Query 221803 GTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAG 221862 || ||| ||| |||||| || || ||||||||||| | || | |||||||| | Sbjct 149855 TTGGTTACTCTTTCGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAAC 149914 Query 221863 CTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACC 221922 ||| | | | | || | ||| | ||| || | ||| | | ||| ||| Sbjct 149915 CTGCGACTCTATGATGGCGAACCACAAATCTTGCGCCTTAACCTGTCGCGTGAAACGACC 149974 Query 221923 CTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAG 221982 |||| || | || || || ||||| | | |||| ||||| | | ||| || Sbjct 149975 CTCGCGCT---CGTAGCCAGTGTAGAGTTTTTGGAACTCCTCACCCCATGTCTCCGACAA 150031 Query 221983 GCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCAT 222042 || ||||| | ||| ||||| | |||||| | ||| ||| ||| | |||||| Sbjct 150032 ACCAGGACAATCGTGGGGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTGCAT 150091 Query 222043 GAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCC 222102 ||| | || || |||||||| || | || | ||||| | || ||| || || Sbjct 150092 GAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCC 150151 Query 222103 GTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGAC 222162 |||| || | || |||||||||||||| || || | ||||| ||||||| ||| | Sbjct 150152 CGTGTTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATAAAT 150211 Query 222163 GGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAA 222222 || | || || ||||||||||| |||||||| ||||| | | | | |||| | Sbjct 150212 AGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTTGTA 150271 Query 222223 GATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCC 222267 || || || | ||||| | ||||||||| ||| || || || Sbjct 150272 GACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCC 150316 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 221029 TTGTACAGAGCCCTTGTTGACCAAAAGCTCGGTACGCATCTCGTCCGTCCATAGACCCCT 221088 ||||| || || |||| | |||| | || | | ||| || || ||| || || Sbjct 149105 TTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCATCCCAGAGCTCCAA 149164 Query 221089 CTCTTCCAGCACCTTGACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCT 221148 ||| ||| |||| | || || | ||||||||||| || ||||| ||||||||||| Sbjct 149165 CTCAGTCAGATCCTTTAGCAAATGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCT 149224 Query 221149 CCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGC 221208 | | ||| | ||| || ||| ||||||||| |||||||||||| ||||| || || Sbjct 149225 ACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGC 149284 Query 221209 CGTGCTGGCGGTGGGCATGGGTGCCACCAGCAG 221241 || ||||| ||||| || || | ||||| Sbjct 149285 AGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAG 149317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842466277440