Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq3 165 5e-35
seq4 127 1e-23
seq2 91.5 1e-12
>seq3
Length=33601328
Score = 165 bits (182), Expect = 5e-35
Identities = 595/920 (65%), Gaps = 18/920 (2%)
Strand=Plus/Minus
Query 475367 ACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGT 475426
|| || || ||| ||||| | || || |||||||| ||||| || | || ||| | |
Sbjct 573093 ACTGCAGGCGATACACATTTGGGAGGAGAAGATTTCGATAACCGAATGGTTTCACATTTT 573034
Query 475427 GTTGAAGATTTCAAGAGGAAAAATAA--AGTTGATCTTT--CAACATCTGCTAAAGCATT 475482
|| ||||| || || | || ||||| || |||| ||||| | ||||||
Sbjct 573033 GTGGAAGAGTTTAAACGTAAGAATAAGAAGGACATCTCGACCAACAAGCG----AGCATT 572978
Query 475483 AAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAAC 475542
| ||||| | || || || ||||| || ||||| || | || | | || || |
Sbjct 572977 GCGTCGTCTACGTACGGCATGCGAACGAGCGAAGCGCACTTTGTCAGCATCAACCCAGGC 572918
Query 475543 TACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGC 475602
| ||||| | ||||| ||||| ||||| ||||||| ||||| ||| || |||||
Sbjct 572917 AAGCATTGAAATCGATTCGCTTTTCGAAGGGATTGATTTCTATACTTCTATAACGAGGGC 572858
Query 475603 TAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGT 475662
|||||||| | || ||| | || | | ||||| || || || | |||
Sbjct 572857 ACGTTTTGAAGAACTCAACTCAGATTTGTTCCGCGACACAATGGAGCCAGTGGCTAAAGC 572798
Query 475663 TCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTC 475722
| ||||| | || | || ||| | | || || || ||| | || || || ||
Sbjct 572797 ATTACGAGATGCCAAGATGGATAAAGGTAATATACACGATATAGTTTTGGTTGGTGGATC 572738
Query 475723 AACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT-TTTAATGGTAAAAAGTTAA 475781
|| | ||||| ||| || ||||| | || || | |||||||| ||| |||| |
Sbjct 572737 CACTCGGATTCCGAAAGTAC-AGAAACTTCTGCAGGATTTCTTTAATGGGAAAGAGTTGA 572679
Query 475782 ATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTT 475841
| || | || || || |||||||| |||||||| ||||| || ||||| || || |
Sbjct 572678 ACAAATCCATCAACCCCGACGAAGCTGTCGCATATGGCGCTGCAGTGCAAGCGGCAATCT 572619
Query 475842 TATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTT 475901
|| ||| | || ||| | | || | | | | || || || ||||| |
Sbjct 572618 TACAAGGAGACACATCGGAGGCGGTGCAGGATTTACTTTTGCTGGATGTTACACCACTGT 572559
Query 475902 CATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTA 475961
| ||||| | ||||| | ||||| | ||||| ||| || | ||||||| |||
Sbjct 572558 CGTTAGGAATCGAAACGGCCGGAGGAGTCATGACCGTTCTGATCAAGCGAAATACCACTA 572499
Query 475962 TCCC-ATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACC 476020
| || | | | ||| | ||| ||| | || || || || |||||| | ||
Sbjct 572498 TACCGACGAAGCAAACCCAAAC-ATTCACTACATACTCGGACAATCAACCTGGGGTTCTA 572440
Query 476021 ATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT 476080
|| ||| | |||||||| ||| | | || ||||| || || ||||| | |||
Sbjct 572439 ATTCAAGTATTTGAAGGAGAACGCGCTATGACGAAAGACAACAATCTTCTTGGTAAATTT 572380
Query 476081 AATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGAT 476140
| || |||||||| || ||||| | ||||| || || ||||| || || || |||
Sbjct 572379 GAACTCAGTGGTATTCCACCCGCTCCACGTGGAGTACCGCAGATTGAGGTCACATTCGAT 572320
Query 476141 ATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAA 476200
|||||||| || ||||| | ||||| ||||| ||| ||||| | |||||| || ||
Sbjct 572319 ATTGATGCTAACGGTATCATGAATGTATCTGCTATTGAGAAATCGACTAACAA-AG--AA 572263
Query 476201 AAT---ATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATG 476257
||| ||||| ||||| ||| || || | | | | | || | || | ||||||
Sbjct 572262 AATCGGATAACAATTACTAACGATAAGGGACGTCTAAGTAAGGAGGACATCGATCGTATG 572203
Query 476258 GTTGATGAAGCCAAAGAGTT 476277
||| |||| || || ||||
Sbjct 572202 GTTAATGAGGCAGAAAAGTT 572183
Score = 149 bits (164), Expect = 4e-30
Identities = 248/352 (70%), Gaps = 10/352 (3%)
Strand=Plus/Minus
Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577
||||| ||| | ||||| || ||||| ||| ||||| | | ||||| |||||||
Sbjct 573552 GATGCGAAACGGTTGATCGGCCGTAAGTTTAATGATCCAGCGGTCCAGAGTGATATGAAG 573493
Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AATACACG 474635
|| ||||| || | || ||| || | ||||||||| | || ||| |||||| |
Sbjct 573492 CACTGGCCGTTCGAAGTTGTAAGTGACGCTGGTAAACCGAAGCTACAAGTGGAATACAAG 573433
Query 474636 CAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGA 474695
|| || | ||| |||| || ||| || | || |||||||| | | |||||||
Sbjct 573432 --GGCGAGAAGAAATCGTTTTTTCCAGAAGAAGTCTCATCAATGGTGCTTACTAAAATGA 573375
Query 474696 AACAAACCGCG--AGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTC 474752
| |||| || |||| || |||||| ||||| | | |||| || || || || |
Sbjct 573374 AGGAAACTGCTGAAGCT--TACCTTGGA-AAGAATATTGCAAATGCGGTTATAACAGTAC 573318
Query 474753 CAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTC 474812
| || || |||||||||||||| ||||| || || || ||||| || |||||| |||
Sbjct 573317 CTGCGTACTTTAATGATTCTCAGCGTCAGGCCACAAAGGATGCAGGTGCAATTGCTGGTT 573258
Query 474813 TTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
| ||||| || ||||| || |||||||| ||||| || ||| |||| || ||
Sbjct 573257 TAAATGTGTTGCGTATCATCAATGAACCGACAGCTGCTGCAATTGCATACGG 573206
Score = 109 bits (120), Expect = 4e-18
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
||| | || |||||||| || || || || ||||||| || | || |||| ||
Sbjct 573820 GCAGTCGGCATTGATTTGGGGACGACGTATTCGTGTGTAGGAGTGTTCCAGCATGGAAAG 573761
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|| || || || || ||||| ||||| ||| |||| |||||||| || || | |||||
Sbjct 573760 GTTGATATTATCGCGAATGATCAAGGCAATCGAACCACACCATCTTACGTGGCGTTTACC 573701
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|| || || | |||||||| ||||| || ||| |||||| ||| ||||| ||||
Sbjct 573700 GATACCGAGCGACTTATTGGTGATGCAGCCAAAAATCAAGTAGCAATGAATCCAAATAAT 573641
Query 474509 ACTATTTTTG 474518
||||||||||
Sbjct 573640 ACTATTTTTG 573631
>seq4
Length=34682002
Score = 127 bits (140), Expect = 1e-23
Identities = 126/163 (77%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157
|||||||||| || || || || ||||| |||||||| ||||||||||| |||| || |
Sbjct 32678013 TAGATTTTTCTTCACCCAACATCGCAAAAGAAATGCACGTTGGACACTTGCGATCCACTA 32677954
Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217
||||||| || || |||| ||| | ||| |||| || | ||| || | | |||| |
Sbjct 32677953 TAATTGGAGATTCAATTTGCAGATTTCTTGAGTTTTTAGGGTTTGATGTTCTACGAATCA 32677894
Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260
||||||| || || ||||||||||| ||||||||| | || ||
Sbjct 32677893 ATCATATCGGAGACTGGGGAACACAGTTTGGTATGCTTATCGC 32677851
>seq2
Length=51801758
Score = 91.5 bits (100), Expect = 1e-12
Identities = 114/154 (74%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || || ||||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct 21000448 ATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCTTCCTT 21000507
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735
||| ||||||||| || || ||||| ||||| | || | | || || || |
Sbjct 21000508 GTCCTGAATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGCTCGA-CCTCCAGAGTGA 21000566
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || || || ||||| |||||||| ||
Sbjct 21000567 TGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTG 21000600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268170578134748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |