Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1 118 5e-22 >seq1 Length=37976048 Score = 118 bits (130), Expect = 5e-22 Identities = 238/350 (68%), Gaps = 10/350 (3%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| || ||||| |||||||||| || || || | ||||| || | | ||||| Sbjct 150086 CTGCATGAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTC 150145 Query 25990 TTTT-CCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTA 26048 |||| ||||| |||||||| || || || || ||||| ||||| |||||||| || | Sbjct 150146 TTTTCCCGTG-TTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCA 150204 Query 26049 AATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTT 26108 |||| |||||||| || || || ||||| || || ||||| | || || | Sbjct 150205 AATAAATAGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTAT 150264 Query 26109 CATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAA----ATCCGTTTGTGCTATGA 26164 ||| | || || ||| || ||||| || | || | || |||| |||||| Sbjct 150265 TGTTGTAGACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCCTGCTATAT 150324 Query 26165 ATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTT 26224 || | |||| | | ||||||| || ||| || ||| || ||||| ||| |||| Sbjct 150325 AT----GTTCCTTTAGCTCTAATACAATGCACATTAAGACCTATGCCACCGGCCGATTTA 150380 Query 26225 GAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATC 26274 || || |||||| | | | |||||| ||||||| | |||||||| Sbjct 150381 GAGATCAATGCACACTGTTTGAGAGTATCGTAAATTCCCTCGATGCTATC 150430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039380131075