Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 120 4e-22 >seq1 Length=37976048 Score = 120 bits (132), Expect = 4e-22 Identities = 870/1394 (62%), Gaps = 34/1394 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| ||||| ||||||| || || |||||||| || || | |||||||||| ||| Sbjct 150607 CCACAACACATGCTCATGCGTGTTGCTATCGGCATACATGGTGCAGACATTGATGCTGCA 150548 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | ||||| ||| || | |||| | | || | ||||| | |||||| | || Sbjct 150547 ATTGAGACGTACAACTTGCTGTCTGAGCGATACTTTACGCACGCCTCGCCAACCATGTTT 150488 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA----GGA 75387 ||| | || | | |||| || |||| |||||||| || |||| ||| Sbjct 150487 GCTGCAGCAACTCAACGACCACAACTGTCGTCCTGCTTCCT----GCTGACAATGTCGGA 150432 Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 75447 || ||| | || || || | ||||| | ||||||| ||||| || | ||| Sbjct 150431 CGATAGCATCGAGGGAATTTACGATACTCTCAAACAGTGTGCATTGATCTCTAAATCGGC 150372 Query 75448 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGAC 75507 || || || || | | | ||| | | ||||| || | | ||| || || Sbjct 150371 CGGTGGCATAGGTCTTAATGTGCATTGTATTAGAGCTAAAGGAACATATATAGCAGGAAC 150312 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 |||||| ||| | || | | || ||||| || || | ||| |||||||| || Sbjct 150311 GAATGGTATATCCAACGGGTTAGTACCTATGCTGCGTGTCTACAACAATACAGCGCGTTA 150252 Query 75568 TGTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATG 75621 || | || ||| || |||| ||| | | || | || ||||| ||||| Sbjct 150251 CGTGGACCA---GGGTGGTAACAAGCGACCTGGGGCATTTGCTATTTATTTGGAGCCATG 150195 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||||| ||||| | ||||| | || | | ||| || | ||||||| || Sbjct 150194 GCATGGGGATATATTTGAGTTTTTGGACCTTAAAAAGAACACGGGAAAAGAAGAGGTCCG 150135 Query 75682 GTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 |||||| | || | | ||||||||||| || | |||||| |||| || || | Sbjct 150134 CGCTAGAGACATGTTCTACGCTCTGTGGATTCCTGATTTGTTCATGCAGCGTGTCGAAGC 150075 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 | ||| | | | || || || | || ||| | || || | ||| Sbjct 150074 AAACGAAATGTGGAGTTTAATGTGCCCCCACGATTGTCCTGGTTTGTCGGAGACATGGGG 150015 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 ||||||||| || |||||||| || || |||||| | || ||||| | Sbjct 150014 TGAGGAGTTCCAAAAACTCTACACTGGCTACGAGCGCGAGGGTCGTTTCAC-GCGACAGG 149956 Query 75862 ACCAGCCGCC-GATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 || ||| ||| | ||| || || | | || ||| ||||||||| || | Sbjct 149955 TTAAGGCGCAAGATTTGTGGTTCGCCATCATAGAGTCGCAGGTTGAGACTGGAGTGCCTT 149896 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 | ||||| ||||| ||||| || || |||||||||||| | || | ||||| |||| Sbjct 149895 ACATGCTCTACAAAGATGCGTGCAATCGAAAGAGTAACCAACAAAACGTTGGAACGATCA 149836 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 || | ||||| || ||||| |||||| | || ||| | || ||||| | ||||| | Sbjct 149835 AGTGTTCAAACCTGTGCACCGAAATTGTGGAATACTCTTCAAAAGATGAAATTGCTGTGT 149776 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATT 76100 | ||| |||| || ||||| || | || ||| || || ||| || | |||| Sbjct 149775 GTAATCTGGCCTCGATCGCTCTAAACATGTTTGTAAAACCCGA---TCGTACATACGATT 149719 Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160 | || || | || | | || | |||||| ||||| ||| | |||| || | Sbjct 149718 TCGCGAAGCTAAAGGAGGTAGCCAAAACTGTTACTCGGAATCTGAACAAAATCATCGATA 149659 Query 76161 GAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217 || | ||||| || || | |||| ||||||||||| ||| | || || | Sbjct 149658 TCAACTACTATCCTGTCCCGGAAGCAAAGCGA---TCTAATATGCGCCACCGTCCGATAG 149602 Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAG 76277 || | || || ||||| | || |||| || || ||| ||| | | | ||| | Sbjct 149601 GTATCGGAGTGCAAGGCATGGCAGATGCTTTCATCTTGATGCGCCATCCTTATGAAAGTG 149542 Query 76278 ATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGG 76337 | |||||| || | | ||| | || ||||||||||| ||| || | || || | Sbjct 149541 AAGAAGCCCAGTTGTTAAATCAACAAATGTTTGAAACCATTTATTTCGGGGCACTTGAAG 149482 Query 76338 CGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGT 76397 | || || || ||||||| | ||| | || || |||| ||| || |||| | Sbjct 149481 CAAGCTGCGAGTTGGCTGCGCTTGATGGTCCATACGAAACATATGATGG-AAGCCCGGTT 149423 Query 76398 CCCA-AGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--ACT 76454 || ||| | ||||| | ||||||||||| | ||| || | | || | | | | Sbjct 149422 AGCAGAGGAATTCTTCAATACGATATGTGGGACAG-GAAGCCCA-CAGAATTGTGGAATT 149365 Query 76455 GGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 76514 ||| || || ||| || || | | ||| | ||||| || | | || | Sbjct 149364 GGGCTGAACTTAAGAAAAAAATTGCTACGTACGGTTTGCGTAATTCGCTGCTACTAGCTC 149305 Query 76515 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACA 76574 | |||||||| || || || || |||||| | || || || || | || ||||| |||| Sbjct 149304 CTATGCCAACCGCTTCGACTGCCCAAATCCTCGGCAACAACGAGTCTTTCGAACCGTACA 149245 Query 76575 CAACAAACATCTAC 76588 || ||||| ||||| Sbjct 149244 CATCAAACGTCTAC 149231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568101118880