Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 127 6e-24 seq2 89.7 2e-12 >seq1 Length=37976048 Score = 127 bits (140), Expect = 6e-24 Identities = 193/272 (71%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 ||||| |||||| | |||||||| || ||||| ||| | || || || || ||| Sbjct 2060940 TCCATGGCCTTGATCAGCCGACGCTGGATGTAACCGGTTTCCGCCGTCTTGACGGCCGTA 2060999 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 ||||| | ||| | ||||| ||||| || |||||| | | ||| ||| |||||| Sbjct 2061000 TCAATCAAACCCTCGCGACCGCCCATGGCGTGGAAGTAAAACTCGGTCGGCGTTAGCCCG 2061059 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTA 302751 | | | ||| | || ||||||||||||| ||| || || ||||||| |||| | Sbjct 2061060 GCCAGGTACGAGTTTTCCACGAAACCACGCGACTCCGGACCGTAATCGTC---CTTGATG 2061116 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| |||||||| | || | ||| | || ||||||||||| || ||||||||| Sbjct 2061117 AAGTGCGGCAGGGTGCGCTTGCGGAACCCGAACGGAATACGCTTTCCCTCGACGTTCTGC 2061176 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || |||| ||| | ||| | ||| || || || Sbjct 2061177 TGCCCCACGCAGGCAATGACCTGGGAGATGTT 2061208 >seq2 Length=51801758 Score = 89.7 bits (98), Expect = 2e-12 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||||||||| || ||| ||||| |||||||| ||||||||||| |||||||| || || Sbjct 48854419 TGCACCGTGCGATATCTGGCAATCGCGCTCCATCTCACCGAAACGTAGACCACCGTCACG 48854360 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | |||||| || || || ||| | || |||||| || || || Sbjct 48854359 GGCACGACCCTCCATCGGTTGTCGCACTAGAATCTGCACCGGACCGCGGGCTCGCGAGTG 48854300 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 |||||| | ||||||||||| |||||||| ||| | | ||||||| ||| Sbjct 48854299 AATCTTATCGTCCACCATATGCTTCAGACGCTGATAGTACGTAGGACCGAGGAA 48854246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813809609737