Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4 138 1e-26 seq33 129 7e-24 seq3 122 1e-21 seq1 113 6e-19 seq2 86.0 8e-11 >seq4 Length=34682002 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| || || ||||| ||||| ||||| | || Sbjct 26230286 GCTTGGCCAGCTCACCGGGCAACAGCAGACGGACAGCGGTTTGGATTTCGCGAGACGTGA 26230345 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| |||||||| |||||||||||||| ||||||| | | ||||| |||| | Sbjct 26230346 TCGTCGAACGCTTGTTGTAGTGCGCCAGACGGGATGCCTCGGCGGCAATGCGCTCGAAGA 26230405 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||| ||||| ||| ||||||||| ||| || | Sbjct 26230406 TGTCGTTCACGAAGCTGTTCATGATGCTCATCGCCTTCGAGGAGATGCCGGTGTCCGGAT 26230465 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||||||||| Sbjct 26230466 GGACCTGCTTCAGCACCTTGTAGATG 26230491 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| || || ||||| ||||| ||||| | || Sbjct 26244130 GCTTGGCCAGCTCACCGGGCAACAGCAGACGGACAGCGGTTTGGATTTCGCGAGACGTGA 26244071 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| |||||||| |||||||||||||| ||||||| | | ||||| |||| | Sbjct 26244070 TCGTCGAACGCTTGTTGTAGTGCGCCAGACGGGATGCCTCGGCGGCAATGCGCTCGAAGA 26244011 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||| ||||| ||| ||||||||| ||| || | Sbjct 26244010 TGTCGTTCACGAAGCTGTTCATGATGCTCATCGCCTTCGAGGAGATGCCGGTGTCCGGAT 26243951 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||||||||| Sbjct 26243950 GGACCTGCTTCAGCACCTTGTAGATG 26243925 >seq33 Length=8323 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || ||| | || || |||||||| ||||| ||||| | || Sbjct 7341 GCTTGGCCAACTCACCAGGCAGCAGCAAACGGACGGCGGTTTGGATTTCGCGGGACGTGA 7282 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| ||||||||| |||| ||||| | | ||||||| |||| | Sbjct 7281 TCGTCGAGCGCTTGTTGTAGTGCGCCAAACGGGACGCCTCAGCGGCGATGCGCTCGAAGA 7222 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||| ||||| ||| ||||||||| ||| |||| Sbjct 7221 TGTCGTTCACGAAGCTGTTCATGATGCTCATCGCCTTCGAGGAGATGCCGGTGTCCGGGT 7162 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| || |||||||||||| Sbjct 7161 GGACCTGCTTCAGGACCTTGTAGATG 7136 >seq3 Length=33601328 Score = 122 bits (134), Expect = 1e-21 Identities = 166/229 (72%), Gaps = 11/229 (5%) Strand=Plus/Minus Query 869173 ATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCC 869232 |||| ||||||| ||||| ||||| || ||| || | | || ||||| ||||| Sbjct 22123461 ATGCAAACCTTCATCGCGCGAGATCAACTCATTGGAGAACGTCAAACCCGGCATCAGGCC 22123402 Query 869233 GCGCTTCTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 |||||||| ||||| |||||||| ||| || ||||| ||| |||||||||||||| | Sbjct 22123401 ACGCTTCTTCAGCCAGAAGATGGCCGCA-AAGCTGCCGCTGAAGAAGATGCCCTCGACAG 22123343 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACT 869348 | || || | | || |||||| | || | | ||| |||| | |||||| | Sbjct 22123342 CTGCGAACGCCACGATACGCTCGCC------GTAGTTGGCCTTCTTGCTCGAGATCCAGT 22123289 Query 869349 TCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 ||||||||||||| ||||| | |||| |||||| ||| |||||||| Sbjct 22123288 TCATCGCCCAGTCCGCCTTACGCTTCACACACGGCAGCGTCTCGATGGC 22123240 Score = 116 bits (128), Expect = 5e-20 Identities = 189/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 || ||||||||||| || ||||| ||| | || || || |||| || ||||| || | Sbjct 19919287 GAAGCCGTGCTCGAGCTGAACGCATCGAATGAACGGGGTATCGATGTGGTGCGGAACAAA 19919228 Query 1574028 ATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATC 1574087 |||||| ||| ||| | | ||||||| || | |||||| | | || Sbjct 19919227 ATCAAGATGTTTGCCCAGCAGAAGGTAACACTGCCGCGTGGCAGACACAAGATCGTTATT 19919168 Query 1574088 CTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAA 1574147 |||||||| || ||| || | || || |||||||||||||| ||| || |||||| Sbjct 19919167 CTCGACGAAGCGGACAGCATGACCGAGGGTGCCCAGCAGGCCCTCCGGCGTACGATGGAA 19919108 Query 1574148 AAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAG 1574207 | ||| ||||||||||||||| || ||||| ||||||||| | | | ||||| Sbjct 19919107 ATCTACAGCAACACGACGCGCTTCGCGCTGGCCTGCAACACGAGCGAAAAGATTATCGAA 19919048 Query 1574208 GCCCTCCAAAGTCGCTGCGCCATTCTGCGCtt 1574239 | ||||| || ||||| || |||||||| Sbjct 19919047 CCGATCCAATCACGGTGCGCTATGCTGCGCTT 19919016 Score = 86.0 bits (94), Expect = 8e-11 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 869635 GTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGAC 869694 ||| | ||| || || ||||||||||| || || || | |||| | ||| || || Sbjct 22123100 GTGCACGTTTTCCATAGCGATCTGGAAACCATAGAAACAGCGAGCCTCCGTCACCTGAAC 22123041 Query 869695 CTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754 ||||| ||||||| || |||| || ||| |||||| || ||| |||||| || || Sbjct 22123040 CTCCTGGCTGAACCGTTCGACCAGATTTTCGTTCACGATACCATCGGAGGCGGCAAAGAA 22122981 Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCG-TCGTCGCTGAGCGACACCCAGTGGACGG 869813 || || || ||| ||||||||| |||||| ||| | | |||| |||||| Sbjct 22122980 GGCGAGCACATGCGAGATAAAGTGACGCTCGCTCGGC-TTCAGCGCATCCCAGTCTTTCA 22122922 Query 869814 TGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCT 869864 |||| || || ||||| ||| | ||||||| || || ||||||| Sbjct 22122921 TGTCCTTAGATAGATCGACCTCTTCGACCGTCCAGAAAGAAGCTTCGGCCT 22122871 >seq1 Length=37976048 Score = 113 bits (124), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 |||||||||| ||||||||| | ||||| || ||| | || || ||| | Sbjct 21718210 AGAAGCGCACGGACGACATCAGCTCCTGGGATGCCGACTTTCTGAAGGTGGACCAGGGAA 21718269 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 |||| || ||| ||||||| || || ||||| |||||||||||| |||| || | Sbjct 21718270 CCCTGTTCGAGCTGATCCTGGCAGCGAACTATCTCGACATCAAGGGATTGCTGGACGTGA 21718329 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 ||||| | || |||||||||||||||||||| | || || ||||| |||||||| | Sbjct 21718330 CCTGCAAAACGGTCGCCAACATGATCAAGGGCAAAACACCGGAAGAGATTCGCAAGACGT 21718389 Query 1592286 TTAACATCAAGTACG 1592300 | ||||| ||| ||| Sbjct 21718390 TCAACATTAAGAACG 21718404 >seq2 Length=51801758 Score = 86.0 bits (94), Expect = 8e-11 Identities = 215/316 (68%), Gaps = 13/316 (4%) Strand=Plus/Plus Query 732962 CAAGCGCGACAAGTCGACCATCCTGCGCACGAACGAGCCCGCCACGGTGCACCGCGTGGT 733021 |||||| ||| |||||| ||||||||| || ||| | || ||| || | Sbjct 48853786 CAAGCGTGACGGATCGACCTTCCTGCGCAACTCGGAAACCGGTATCGTCGACCAGGTCAT 48853845 Query 733022 GGTGACGCGCAACGGCGACGGCGCCAACGCCGTCAAGAT-CGTGACGCGCGCCATGCGCC 733080 | | |||| |||| |||| ||| ||| | ||| || || | | || | ||||| Sbjct 48853846 GCTTACGCTCAACAGCGAGGGCTACAAGTTCTGCAAAATTCGAGTC-CGTTCGGTGCGC- 48853903 Query 733081 AGCCCG-AGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAGC 733139 | |||| || | || ||||| | | || ||||||||||| || ||||| | || | Sbjct 48853904 ATCCCGCAGATTGGAGACAAGTTTGCTTCTCGCCACGGCCAGAAAGGCAC---GTGCGGT 48853960 Query 733140 GTGCGCT-CCACC--GAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACATC 733196 | | | || | ||||| ||||| | || | | ||| ||| |||||| ||||| Sbjct 48853961 ATTCAGTACCGGCAGGAGGATATGCCGT--TCAC-GTGCGAAGGCATCACGCCGGACATT 48854017 Query 733197 GTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTC 733256 | ||||||||||||||||| ||||| || |||||||| ||| | || ||||| | || Sbjct 48854018 ATCATCAACCCGCACGCCATTCCGTCCCGTATGACCATCGGCCATCTGATCGAGTGCATC 48854077 Query 733257 CTGGGCAAGGTGGCCT 733272 | ||||||| ||| || Sbjct 48854078 CAGGGCAAGCTGGGCT 48854093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107122704998717