Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4 127 2e-24 seq2 82.4 6e-11 >seq4 Length=34682002 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| ||||| || | ||||| ||||| | |||||| | | |||| || || | Sbjct 15713620 CGGTGGGTTCTTGATGATGAACGTGTTCACCTTATGGTTTACCTCGAGCGGCCCATGGAA 15713679 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 |||||| || ||||| ||||| | || | ||| || | || |||||||| || || Sbjct 15713680 ACCGCAGGCCTTGCAACCCTGCGAAATCGTTCCCTTCTTCGACGATACGATGAGATCCGT 15713739 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||||| |||||||| ||||| || | ||| |||||||| ||||| || |||||||| || Sbjct 15713740 TTCCGGATTGTCACACTCCGGGCAGAGCACGAACTTGCGAATGAAGCCGTCAAGCAGATC 15713799 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | ||| | ||||| || || || || |||||||||||||| Sbjct 15713800 CTGCAGCTTCGTCGCATCGTGCGAACCATTTACAATGAATCGTTCGTT 15713847 >seq2 Length=51801758 Score = 82.4 bits (90), Expect = 6e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 110357 AAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAA 110416 |||||| ||||| |||||| | ||| ||||| || | ||||| | || || || Sbjct 21000519 AAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAGCAGCGTCTTATCTTCGCTGGAAAG 21000460 Query 110417 CAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCAC 110476 ||||||||||||| | || || | || |||||||| || || || |||||| ||||| Sbjct 21000459 CAGCTGGAGGATGGTCGCACGCTGTCCGACTACAACATCCAGAAGGAGTCTACGCTGCAC 21000400 Query 110477 ATGGTGTTAAGACTGCGAGGGGGAA 110501 |||| || | ||||| || |||| Sbjct 21000399 TTGGTCCTACGTCTGCGTGGTGGAA 21000375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840588667093