Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq4 174 2e-37
seq33 165 1e-34
seq3 111 2e-18
seq1 102 1e-15
seq2 93.3 7e-13
>seq4
Length=34682002
Score = 174 bits (192), Expect = 2e-37
Identities = 183/241 (76%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||||||||| || ||||| |||||||||||| ||||||| || ||| |||
Sbjct 26230247 TGTACTTGGTGACGGCCTTCGTTCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGCA 26230306
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| || || ||||| ||||| ||||| | |||||| |||||||| |
Sbjct 26230307 ACAGCAGACGGACAGCGGTTTGGATTTCGCGAGACGTGATCGTCGAACGCTTGTTGTAGT 26230366
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||| ||| ||||||| | | ||||| |||| |||||||| || || |||||
Sbjct 26230367 GCGCCAGACGGGATGCCTCGGCGGCAATGCGCTCGAAGATGTCGTTCACGAAGCTGTTCA 26230426
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| || ||||||||| ||| || || |||||||| ||||||||||
Sbjct 26230427 TGATGCTCATCGCCTTCGAGGAGATGCCGGTGTCCGGATGGACCTGCTTCAGCACCTTGT 26230486
Query 1485710 A 1485710
|
Sbjct 26230487 A 26230487
Score = 174 bits (192), Expect = 2e-37
Identities = 183/241 (76%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||||||||| || ||||| |||||||||||| ||||||| || ||| |||
Sbjct 26244169 TGTACTTGGTGACGGCCTTCGTTCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGCA 26244110
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| || || ||||| ||||| ||||| | |||||| |||||||| |
Sbjct 26244109 ACAGCAGACGGACAGCGGTTTGGATTTCGCGAGACGTGATCGTCGAACGCTTGTTGTAGT 26244050
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||| ||| ||||||| | | ||||| |||| |||||||| || || |||||
Sbjct 26244049 GCGCCAGACGGGATGCCTCGGCGGCAATGCGCTCGAAGATGTCGTTCACGAAGCTGTTCA 26243990
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| || ||||||||| ||| || || |||||||| ||||||||||
Sbjct 26243989 TGATGCTCATCGCCTTCGAGGAGATGCCGGTGTCCGGATGGACCTGCTTCAGCACCTTGT 26243930
Query 1485710 A 1485710
|
Sbjct 26243929 A 26243929
>seq33
Length=8323
Score = 165 bits (182), Expect = 1e-34
Identities = 181/241 (75%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||||||||| || ||||| || ||||||||| |||||| || || |||
Sbjct 7380 TGTACTTGGTGACGGCCTTCGTTCCCTCGGAAACGGCGTGCTTGGCCAACTCACCAGGCA 7321
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || || |||||||| ||||| ||||||| |||||| ||||||||| |
Sbjct 7320 GCAGCAAACGGACGGCGGTTTGGATTTCGCGGGACGTGATCGTCGAGCGCTTGTTGTAGT 7261
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||| ||| ||||| | | ||||||| |||| |||||||| || || |||||
Sbjct 7260 GCGCCAAACGGGACGCCTCAGCGGCGATGCGCTCGAAGATGTCGTTCACGAAGCTGTTCA 7201
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| || ||||||||| ||| ||||| |||||||| || |||||||
Sbjct 7200 TGATGCTCATCGCCTTCGAGGAGATGCCGGTGTCCGGGTGGACCTGCTTCAGGACCTTGT 7141
Query 1485710 A 1485710
|
Sbjct 7140 A 7140
>seq3
Length=33601328
Score = 111 bits (122), Expect = 2e-18
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254
||||||| ||| | |||||| | | || ||||| || || ||| || | || ||
Sbjct 19919197 CTGCCGCGTGGCAGACACAAGATCGTTATTCTCGACGAAGCGGACAGCATGACCGAGGGT 19919138
Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314
||||||||||||||||| || ||||||| |||| |||||||||||| || ||||||
Sbjct 19919137 GCCCAGCAGGCCCTCCGGCGTACGATGGAAATCTACAGCAACACGACGCGCTTCGCGCTG 19919078
Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374
|||||||||||| | | | |||||| | |||| || ||||| || |||||
Sbjct 19919077 GCCTGCAACACGAGCGAAAAGATTATCGAACCGATCCAATCACGGTGCGCTATGCTGCGC 19919018
Query 2019375 TTTGCGCGCCTCACCGACGCCCAGAT 2019400
|| || ||| ||||||| || ||
Sbjct 19919017 TTCTCGAAACTCTCCGACGCACAAAT 19918992
Score = 104 bits (114), Expect = 4e-16
Identities = 157/221 (71%), Gaps = 7/221 (3%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
|||||| ||||| |||||| || ||| || | || ||||| ||||| |||||
Sbjct 22123455 ACCTTCATCGCGCGAGATCAACTCATTGGAGAACGTCAAACCCGGCATCAGGCCACGCTT 22123396
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||| ||||| |||||||| || ||||| ||| |||||||||||||| || || ||
Sbjct 22123395 CTTCAGCCAGAAGATGGCCGCAAAGCTGCCGCTGAAGAAGATGCCCTCGACAGCTGCGAA 22123336
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCC 794517
| |||| ||||| || ||| |||| |||| | |||||| |||||||||
Sbjct 22123335 CGCCACGATACGCTC-GCCGTAGT----TGGCCTTCTTGCTCGAGATCCAGTTCATCGCC 22123281
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558
|| || ||||| | |||| | |||| ||| ||||||||
Sbjct 22123280 CAGTCCGCCTTACGCTTCACACACGGCAGCGTCTCGATGGC 22123240
Score = 87.8 bits (96), Expect = 3e-11
Identities = 139/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
||||| | ||||| | || || ||||||| |||| || || |||| || || |
Sbjct 22123066 AAACAGCGAGCCTCCGTCACCTGAACCTCCTGGCTGAACCGTTCGACCAGATTTTCGTTC 22123007
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCG-TC 796259
||||| || ||| |||||| || |||||||| || ||| |||||||||||||||| ||
Sbjct 22123006 ACGATACCATCGGAGGCGGCAAAGAAGGCGAGCACATGCGAGATAAAGTGACGCTCGCTC 22122947
Query 796260 GTCGCTGAGCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCA 796319
| | | |||| |||||| | |||| || |||||||| ||| | |||||
Sbjct 22122946 GGC-TTCAGCGCATCCCAGTCTTTCATGTCCTTAGATAGATCGACCTCTTCGACCGTCCA 22122888
Query 796320 AAAGGAGGCCTCGGCCT 796336
|| || || |||||||
Sbjct 22122887 GAAAGAAGCTTCGGCCT 22122871
>seq1
Length=37976048
Score = 102 bits (112), Expect = 1e-15
Identities = 140/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625
|| |||||||| |||||||| | ||||| | |||| |||| |||||
Sbjct 21718209 GAGAAGCGCACGGACGACATCAGCTCCTGGGATGCCGACTTTCTGAAGGTGGACCAGGGA 21718268
Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685
||||| || ||| ||||||| || || ||||| |||||||||||| | || || ||
Sbjct 21718269 ACCCTGTTCGAGCTGATCCTGGCAGCGAACTATCTCGACATCAAGGGATTGCTGGACGTG 21718328
Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745
||||| || || |||||| | ||||||||||| | || || || || ||||||||
Sbjct 21718329 ACCTGCAAAACGGTCGCCAACATGATCAAGGGCAAAACACCGGAAGAGATTCGCAAGACG 21718388
Query 2035746 TTTAACATCAAGTACG 2035761
|| ||||| ||| |||
Sbjct 21718389 TTCAACATTAAGAACG 21718404
>seq2
Length=51801758
Score = 93.3 bits (102), Expect = 7e-13
Identities = 213/313 (68%), Gaps = 7/313 (2%)
Strand=Plus/Plus
Query 653527 CAAGCGCGACAAGTCGACCATCCTGCGCACCAACGAGGCCGCCACGGTGCACCGCGTCGT 653586
|||||| ||| |||||| ||||||||| | || ||| | || ||| ||| |
Sbjct 48853786 CAAGCGTGACGGATCGACCTTCCTGCGCAACTCGGAAACCGGTATCGTCGACCAGGTCAT 48853845
Query 653587 GGTGACGCGCAACGGCGACGGCGCCAACGCGGTCAAGATCGTCACCCGCGCCATGCGCCA 653646
| | |||| |||| |||| ||| ||| ||| || ||| | ||||| |
Sbjct 48853846 GCTTACGCTCAACAGCGAGGGCTACAAGTTCTGCAAAATTCGAGTCCGTTCGGTGCGC-A 48853904
Query 653647 GCCCG-AGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTG-GGCAGC 653704
|||| || | || ||||| | | || |||||||| || || ||||| ||| || |
Sbjct 48853905 TCCCGCAGATTGGAGACAAGTTTGCTTCTCGCCACGGCCAGAAAGGCAC-GTGCGGTATT 48853963
Query 653705 GTGCGCTCGACCGAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTC 653764
| | | ||||| ||||||| || | | ||| ||| |||||| ||||| ||
Sbjct 48853964 CAGTACCGGCAGGAGGATATGCCGT--TCAC-GTGCGAAGGCATCACGCCGGACATTATC 48854020
Query 653765 ATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTG 653824
||||||||||||||||| ||||| || |||||||| ||| | |||| ||| | ||| |
Sbjct 48854021 ATCAACCCGCACGCCATTCCGTCCCGTATGACCATCGGCCATCTGATCGAGTGCATCCAG 48854080
Query 653825 GGCAAGGTGGCCT 653837
|||||| ||| ||
Sbjct 48854081 GGCAAGCTGGGCT 48854093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916225018713239
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |