Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4 174 2e-37 seq33 165 1e-34 seq3 111 2e-18 seq1 102 1e-15 seq2 93.3 7e-13 >seq4 Length=34682002 Score = 174 bits (192), Expect = 2e-37 Identities = 183/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||| || ||||| |||||||||||| ||||||| || ||| ||| Sbjct 26230247 TGTACTTGGTGACGGCCTTCGTTCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGCA 26230306 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| || || ||||| ||||| ||||| | |||||| |||||||| | Sbjct 26230307 ACAGCAGACGGACAGCGGTTTGGATTTCGCGAGACGTGATCGTCGAACGCTTGTTGTAGT 26230366 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||| ||| ||||||| | | ||||| |||| |||||||| || || ||||| Sbjct 26230367 GCGCCAGACGGGATGCCTCGGCGGCAATGCGCTCGAAGATGTCGTTCACGAAGCTGTTCA 26230426 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || ||||||||| ||| || || |||||||| |||||||||| Sbjct 26230427 TGATGCTCATCGCCTTCGAGGAGATGCCGGTGTCCGGATGGACCTGCTTCAGCACCTTGT 26230486 Query 1485710 A 1485710 | Sbjct 26230487 A 26230487 Score = 174 bits (192), Expect = 2e-37 Identities = 183/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||| || ||||| |||||||||||| ||||||| || ||| ||| Sbjct 26244169 TGTACTTGGTGACGGCCTTCGTTCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGCA 26244110 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| || || ||||| ||||| ||||| | |||||| |||||||| | Sbjct 26244109 ACAGCAGACGGACAGCGGTTTGGATTTCGCGAGACGTGATCGTCGAACGCTTGTTGTAGT 26244050 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||| ||| ||||||| | | ||||| |||| |||||||| || || ||||| Sbjct 26244049 GCGCCAGACGGGATGCCTCGGCGGCAATGCGCTCGAAGATGTCGTTCACGAAGCTGTTCA 26243990 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || ||||||||| ||| || || |||||||| |||||||||| Sbjct 26243989 TGATGCTCATCGCCTTCGAGGAGATGCCGGTGTCCGGATGGACCTGCTTCAGCACCTTGT 26243930 Query 1485710 A 1485710 | Sbjct 26243929 A 26243929 >seq33 Length=8323 Score = 165 bits (182), Expect = 1e-34 Identities = 181/241 (75%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||| || ||||| || ||||||||| |||||| || || ||| Sbjct 7380 TGTACTTGGTGACGGCCTTCGTTCCCTCGGAAACGGCGTGCTTGGCCAACTCACCAGGCA 7321 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || |||||||| ||||| ||||||| |||||| ||||||||| | Sbjct 7320 GCAGCAAACGGACGGCGGTTTGGATTTCGCGGGACGTGATCGTCGAGCGCTTGTTGTAGT 7261 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| ||| ||||| | | ||||||| |||| |||||||| || || ||||| Sbjct 7260 GCGCCAAACGGGACGCCTCAGCGGCGATGCGCTCGAAGATGTCGTTCACGAAGCTGTTCA 7201 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || ||||||||| ||| ||||| |||||||| || ||||||| Sbjct 7200 TGATGCTCATCGCCTTCGAGGAGATGCCGGTGTCCGGGTGGACCTGCTTCAGGACCTTGT 7141 Query 1485710 A 1485710 | Sbjct 7140 A 7140 >seq3 Length=33601328 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 ||||||| ||| | |||||| | | || ||||| || || ||| || | || || Sbjct 19919197 CTGCCGCGTGGCAGACACAAGATCGTTATTCTCGACGAAGCGGACAGCATGACCGAGGGT 19919138 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 ||||||||||||||||| || ||||||| |||| |||||||||||| || |||||| Sbjct 19919137 GCCCAGCAGGCCCTCCGGCGTACGATGGAAATCTACAGCAACACGACGCGCTTCGCGCTG 19919078 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374 |||||||||||| | | | |||||| | |||| || ||||| || ||||| Sbjct 19919077 GCCTGCAACACGAGCGAAAAGATTATCGAACCGATCCAATCACGGTGCGCTATGCTGCGC 19919018 Query 2019375 TTTGCGCGCCTCACCGACGCCCAGAT 2019400 || || ||| ||||||| || || Sbjct 19919017 TTCTCGAAACTCTCCGACGCACAAAT 19918992 Score = 104 bits (114), Expect = 4e-16 Identities = 157/221 (71%), Gaps = 7/221 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 |||||| ||||| |||||| || ||| || | || ||||| ||||| ||||| Sbjct 22123455 ACCTTCATCGCGCGAGATCAACTCATTGGAGAACGTCAAACCCGGCATCAGGCCACGCTT 22123396 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| ||||| |||||||| || ||||| ||| |||||||||||||| || || || Sbjct 22123395 CTTCAGCCAGAAGATGGCCGCAAAGCTGCCGCTGAAGAAGATGCCCTCGACAGCTGCGAA 22123336 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCC 794517 | |||| ||||| || ||| |||| |||| | |||||| ||||||||| Sbjct 22123335 CGCCACGATACGCTC-GCCGTAGT----TGGCCTTCTTGCTCGAGATCCAGTTCATCGCC 22123281 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 || || ||||| | |||| | |||| ||| |||||||| Sbjct 22123280 CAGTCCGCCTTACGCTTCACACACGGCAGCGTCTCGATGGC 22123240 Score = 87.8 bits (96), Expect = 3e-11 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||| | ||||| | || || ||||||| |||| || || |||| || || | Sbjct 22123066 AAACAGCGAGCCTCCGTCACCTGAACCTCCTGGCTGAACCGTTCGACCAGATTTTCGTTC 22123007 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCG-TC 796259 ||||| || ||| |||||| || |||||||| || ||| |||||||||||||||| || Sbjct 22123006 ACGATACCATCGGAGGCGGCAAAGAAGGCGAGCACATGCGAGATAAAGTGACGCTCGCTC 22122947 Query 796260 GTCGCTGAGCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCA 796319 | | | |||| |||||| | |||| || |||||||| ||| | ||||| Sbjct 22122946 GGC-TTCAGCGCATCCCAGTCTTTCATGTCCTTAGATAGATCGACCTCTTCGACCGTCCA 22122888 Query 796320 AAAGGAGGCCTCGGCCT 796336 || || || ||||||| Sbjct 22122887 GAAAGAAGCTTCGGCCT 22122871 >seq1 Length=37976048 Score = 102 bits (112), Expect = 1e-15 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || |||||||| |||||||| | ||||| | |||| |||| ||||| Sbjct 21718209 GAGAAGCGCACGGACGACATCAGCTCCTGGGATGCCGACTTTCTGAAGGTGGACCAGGGA 21718268 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 ||||| || ||| ||||||| || || ||||| |||||||||||| | || || || Sbjct 21718269 ACCCTGTTCGAGCTGATCCTGGCAGCGAACTATCTCGACATCAAGGGATTGCTGGACGTG 21718328 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 ||||| || || |||||| | ||||||||||| | || || || || |||||||| Sbjct 21718329 ACCTGCAAAACGGTCGCCAACATGATCAAGGGCAAAACACCGGAAGAGATTCGCAAGACG 21718388 Query 2035746 TTTAACATCAAGTACG 2035761 || ||||| ||| ||| Sbjct 21718389 TTCAACATTAAGAACG 21718404 >seq2 Length=51801758 Score = 93.3 bits (102), Expect = 7e-13 Identities = 213/313 (68%), Gaps = 7/313 (2%) Strand=Plus/Plus Query 653527 CAAGCGCGACAAGTCGACCATCCTGCGCACCAACGAGGCCGCCACGGTGCACCGCGTCGT 653586 |||||| ||| |||||| ||||||||| | || ||| | || ||| ||| | Sbjct 48853786 CAAGCGTGACGGATCGACCTTCCTGCGCAACTCGGAAACCGGTATCGTCGACCAGGTCAT 48853845 Query 653587 GGTGACGCGCAACGGCGACGGCGCCAACGCGGTCAAGATCGTCACCCGCGCCATGCGCCA 653646 | | |||| |||| |||| ||| ||| ||| || ||| | ||||| | Sbjct 48853846 GCTTACGCTCAACAGCGAGGGCTACAAGTTCTGCAAAATTCGAGTCCGTTCGGTGCGC-A 48853904 Query 653647 GCCCG-AGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTG-GGCAGC 653704 |||| || | || ||||| | | || |||||||| || || ||||| ||| || | Sbjct 48853905 TCCCGCAGATTGGAGACAAGTTTGCTTCTCGCCACGGCCAGAAAGGCAC-GTGCGGTATT 48853963 Query 653705 GTGCGCTCGACCGAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTC 653764 | | | ||||| ||||||| || | | ||| ||| |||||| ||||| || Sbjct 48853964 CAGTACCGGCAGGAGGATATGCCGT--TCAC-GTGCGAAGGCATCACGCCGGACATTATC 48854020 Query 653765 ATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTG 653824 ||||||||||||||||| ||||| || |||||||| ||| | |||| ||| | ||| | Sbjct 48854021 ATCAACCCGCACGCCATTCCGTCCCGTATGACCATCGGCCATCTGATCGAGTGCATCCAG 48854080 Query 653825 GGCAAGGTGGCCT 653837 |||||| ||| || Sbjct 48854081 GGCAAGCTGGGCT 48854093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916225018713239