Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 2e-28
seq2 127 1e-24
>seq1
Length=37976048
Score = 140 bits (154), Expect = 2e-28
Identities = 161/215 (75%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||||| || ||||||||| ||||| ||||| || ||| | || | ||
Sbjct 21735275 CAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTC 21735334
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| ||||||||||| || || ||||| || |||| | |||||||||||
Sbjct 21735335 TTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTC 21735394
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || || |||||| |||| ||| |||
Sbjct 21735395 CTGGATCTTGGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATG 21735452
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||||||||| || || |||||||||||
Sbjct 21735453 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 21735487
Score = 113 bits (124), Expect = 3e-20
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || || || | ||| ||||||||| ||||| |||||||| ||| | || ||||
Sbjct 36315772 CAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATC 36315713
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| |||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 36315712 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTC 36315653
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || || | || | |||||| || | || |||
Sbjct 36315652 CTGGATCTTCGCCTTCAC--ATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATG 36315595
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || ||||| || || || || ||||||||
Sbjct 36315594 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 36315560
>seq2
Length=51801758
Score = 127 bits (140), Expect = 1e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | || ||||||||| ||||| ||||| || || |||| ||||
Sbjct 21000392 AGGACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGACCATCC 21000451
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| |||||||| |||||||| || || ||||| ||| | || | || ||||||||
Sbjct 21000452 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 21000511
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCG-ATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || ||| || ||| | |||| || | |||| ||||| || | || |||||
Sbjct 21000512 TGAATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGC-TCGACCTCCAGAGTGATGGT 21000570
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||||| || |||||||| || || |||||||||
Sbjct 21000571 CTTTCCTGTCAGGGTCTTCACGAAAATCTGCATG 21000604
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| |||||||| || || ||| | || | ||
Sbjct 36664903 AGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCC 36664844
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 36664843 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 36664784
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | ||| || || | || ||||||
Sbjct 36664783 TGGATCTTGGCCTTCACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTC 36664724
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | |||||| || |||||||||||
Sbjct 36664723 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 36664692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692002154419
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |