Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 8e-27
seq2 100 2e-15
seq4 96.9 3e-14
>seq3
Length=33601328
Score = 138 bits (152), Expect = 8e-27
Identities = 141/184 (77%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
||||||||||||| ||||||| | ||| |||||| |||||||||||| ||||| ||
Sbjct 573631 CAAAAATAGTATTATTTGGATTCATTGCTACTTGATTTTTGGCTGCATCACCAATAAGTC 573690
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
| || || || ||||| | || || ||||| || || ||||| |||||||||||||| |
Sbjct 573691 GCTCGGTATCGGTAAACGCCACGTAAGATGGTGTGGTTCGATTGCCTTGATCATTCGCGA 573750
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
|||| ||||| || |||| || | || |||||||| | | || || || |||||||
Sbjct 573751 TAATATCAACCTTTCCATGCTGGAACACTCCTACACACGAATACGTCGTCCCCAAATCAA 573810
Query 282870 TACC 282873
| ||
Sbjct 573811 TGCC 573814
>seq2
Length=51801758
Score = 100 bits (110), Expect = 2e-15
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730
|| || ||||| || || || || || || ||||| || || | || | || | |||
Sbjct 30116719 CCGATCAATCGCTTGGCGTCGAAGATTGTGTTGGTCGGGTTCATGGCCACCTGGTTCTTG 30116660
Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790
|| ||||| || |||||| | || || || || || | ||| || || || || |||||
Sbjct 30116659 GCAGCATCACCGATCAGACGCTCGGTGTCGGTGAAGGCAACGTAGGACGGGGTCGTGCGG 30116600
Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850
|| || || || || |||||||||||||| || |||| || | || || || || ||
Sbjct 30116599 TTGCCCTGGTCGTTGGCAATAATTTCAACCTTGCCATGCTGAAACACTCCAACGCAGCTG 30116540
Query 282851 AAAGTTGTTCCTAAATCAATACC 282873
| || ||||| | |||||||||
Sbjct 30116539 TAGGTCGTTCCCAGATCAATACC 30116517
>seq4
Length=34682002
Score = 96.9 bits (106), Expect = 3e-14
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 637121 TTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGAT 637180
||||||| |||| |||||| || || || || ||||||||||| ||||||| || |||
Sbjct 32678019 TTATTGTAGATTTTTCTTCACCCAACATCGCAAAAGAAATGCACGTTGGACACTTGCGAT 32677960
Query 637181 CAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATC 637240
| ||||| ||||| || || ||||| || | | || | | || |||||| |
Sbjct 32677959 CCACTATAATTGGAGATTCAATTTGCAGATTTCTTGAGTTTTTAGGGTTTGATGTTCTAC 32677900
Query 637241 GTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 637293
| || |||||| | || || |||||||| || || |||||| | || ||| ||
Sbjct 32677899 GAATCAATCATATCGGAGACTGGGGAACACAGTTTGGTATGCTTATCGCTCAT 32677847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740620531749426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |