Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 8e-17
>seq1
Length=37976048
Score = 102 bits (112), Expect = 8e-17
Identities = 533/842 (63%), Gaps = 23/842 (3%)
Strand=Plus/Plus
Query 150371 ACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTG 150430
|||||||| || || ||| | ||||| ||||| ||||| ||||| || |||||
Sbjct 148851 ACGGTAAACTGAATCGCATTAACAGCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTA 148910
Query 150431 AGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAGTAGGGTTTGCC 150490
||||| |||||| ||||| | || | || | | |||| | | || | ||
Sbjct 148911 AGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCT 148970
Query 150491 ATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTGCCATTTCA 150550
| || | ||||| || || |||||| |||||||| || | || || ||||||| |
Sbjct 148971 ACGTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGCCATTTTA 149030
Query 150551 AT-CATATATTTTCCATTGTTCTCCCAAATTTCCCAGATTGTCATGTACAGCTTTTTTAG 150609
|| || | ||| || || | |||||||||| || ||||||| || ||
Sbjct 149031 ATGCA---AGTTTTCACTGAT-------ATTTCCCAGACCGTTTTGTACAGATTGCGTAT 149080
Query 150610 ATTGTCGGGAATTTTGGCGATAGAAGCTATCGATCCTCTGTTTGCCATGAT--TGTTTTT 150667
| | ||||||| | ||| ||| ||||| ||| |||| ||| |||||||
Sbjct 149081 GTGTTGCGGAATTTCCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTT 149140
Query 150668 CGCATACTATTTGTATAGAGATTTAATTTGATTAGATCATCGACCAAGTAGCGGTTGACA 150727
| || || |||| | || | | ||||| | | ||| | | || ||
Sbjct 149141 C--ATTTCATCATCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACC 149198
Query 150728 ACTTGAAATTCGCCCGACAAAACACGTC--TCAAAAACAAATTACTGTGAAACGGTTCAA 150785
||||||||||| || || | || | | | | || | | |||| | |||||| |
Sbjct 149199 ACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGA-TGTGTA-CGGTTCGA 149256
Query 150786 ATGACTCGTTGTTGTTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCACAAGCA 150845
| |||||||||||| ||| ||||| || |||| || || ||||| || | ||||
Sbjct 149257 AAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCA 149316
Query 150846 ATGAATTACGTAATCCGTATTTTTGTATATTTATTTTCAACTGTGACCAGTCCCATAACG 150905
|||||||| || ||||| | || ||| | || | | | ||| | ||| ||
Sbjct 149317 GCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATT 149376
Query 150906 AAGTCGGTACCGTATTCCACAAATCGTATTGCAATATTCCTTCGCTCGCTTTGCTACCGG 150965
|| || | | | ||||| ||||||||| | |||||| ||| | ||| ||
Sbjct 149377 CTGTGGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCAT 149436
Query 150966 CAAACGTGCTATAAGGCTCACTAACAGATGCCAGTTCGTAACTGGCCTCGAGCGCAGCAT 151025
|| | || || || || || | |||| ||| | || || || || || |
Sbjct 149437 CATATGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGA 149496
Query 151026 GATACACAGTTTCAGCAATTTGTTTATTCAATAGAACGGCAGCATCGCTCACGTACGGTA 151085
||| | |||||| ||||||| ||| || | ||| | || || | || ||
Sbjct 149497 AATAAATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGAT 149556
Query 151086 TGCGCAACATAACAAATGCATCGGCCAAACCTTGAATGCCTATGCCGATGGGACGATGGC 151145
||||| || | || ||||| |||| ||||| | || || || || ||||| ||||
Sbjct 149557 GGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGC 149616
Query 151146 GCATATTAGAtttttttGCAGTTTC--AATAGGGTAGAAATTGCGATCAATAATTTTATT 151203
||||||||||| ||||| || | | ||| ||| | ||| ||| || ||||| ||
Sbjct 149617 GCATATTAGATCGCTTTGC--TTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTT 149674
Query 151204 CA 151205
||
Sbjct 149675 CA 149676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488542772533200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |