Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 192 6e-44 seq2 131 2e-25 seq3 122 8e-23 >seq1 Length=37976048 Score = 192 bits (212), Expect = 6e-44 Identities = 1094/1733 (63%), Gaps = 36/1733 (2%) Strand=Plus/Plus Query 148046 ATTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATG--AGT 148103 ||| || ||||| || ||||| || || || || || || ||||||| |||| ||| Sbjct 148979 ATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGCCATTTTAATGCAAGT 149038 Query 148104 CGCTTTATCTTC-ATCTCCCAGGCCGTCTTGTACAGCC-GCTTGATATGATCGGGAATGC 148161 ||| || || |||||| |||| |||||||| || | || || | ||||| Sbjct 149039 ---TTTCACTGATATTTCCCAGACCGTTTTGTACAGATTGCGT-ATGTGTTGCGGAATTT 149094 Query 148162 CGTCGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGT 148221 | || || || | || || ||| || || |||| || |||||| || Sbjct 149095 CCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCATCCC 149154 Query 148222 ATAGGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGG 148281 | || | | ||| |||| || | | || || ||||||||||| ||||| || || | Sbjct 149155 AGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACCACTTGAAATTCTCCTG 149214 Query 148282 CGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCA 148341 |||||| | || || ||||| || ||||||| || |||||||||||||| | Sbjct 149215 AGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGA 149274 Query 148342 AAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGC 148401 || || || |||| || || ||||| |||| |||||||| || ||||||||| Sbjct 149275 GGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACCGT 149334 Query 148402 GATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCC 148461 | ||||| ||| || | ||||| | ||| | | || || || || Sbjct 149335 ACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATTCTGTGGGCTTCCTGTCCC 149394 Query 148462 ACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTC 148521 |||| ||||| || ||||| || | |||| | ||||| || || || | ||| || | Sbjct 149395 ACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCATCATATGTTTCGTATGGAC 149454 Query 148522 CGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAA 148581 | | ||| |||| |||||||| || || || || ||| | ||||| || || | Sbjct 149455 CATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACA 149514 Query 148582 TTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACG 148641 |||| || | || | || || ||||| || || |||| | | || | Sbjct 149515 TTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAG 149574 Query 148642 CGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCG 148701 | || || | ||| || || || | || || || ||||| || || || | | Sbjct 149575 CATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGCGCATATTAGATCGCTTTG 149634 Query 148702 CGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCT 148761 | | || ||||||| |||| |||||||| |||| ||||| || | | || | Sbjct 149635 CTTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTTCAGATTCCG-AGTAACAGTT 149693 Query 148762 TTGTAATTCTGC-GCAGCAATTCAAAATCGTACTTGTCATC------TACGATGCATCGG 148814 ||| || | ||| | |||||||| | ||| ||| | ||| | Sbjct 149694 TTGGCTACCTCCTTTAGCTTCGCGAAATCGTATGTACGATCGGGTTTTAC-AAACAT--G 149750 Query 148815 TTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACG 148874 || | ||||| ||||| ||||| ||||| || | ||||| | ||| || || Sbjct 149751 TTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTCATCTTTTGAAGAGTATTCCACA 149810 Query 148875 ATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTG 148934 || |||| |||||| || || |||||| || ||||| | ||| || ||||| | Sbjct 149811 ATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGA 149870 Query 148935 TTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT- 148993 |||||||| || ||||| |||||||| || | ||||| || ||||||| || | || Sbjct 149871 TTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGATG 149930 Query 148994 --GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTAT 149051 ||||| || || ||||| || || || | | |||||||| ||||||| Sbjct 149931 GCGAACC---ACAAATCTTGCGCCTTAACCTGTCGCGTGAAACGACCCTCGCGCTCGTAG 149987 Query 149052 AAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGC 149111 ||| || || | |||| |||| || | || | ||| || || | ||| Sbjct 149988 CCAGTGTAGAGTTTTTGGAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGG 150047 Query 149112 GGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACC 149171 |||||||| | ||||| ||| || | || |||| ||| |||| ||| || | | Sbjct 150048 GGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTGCATGAACAAATCAGGAATC 150107 Query 149172 CAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGG 149231 || || ||||| | | ||| | || | ||||| ||| |||| ||| Sbjct 150108 CACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAAGG 150167 Query 149232 TTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTG 149291 | | | ||||| ||| | ||||| ||||| | || | || | || || Sbjct 150168 TCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGT 150227 Query 149292 CGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGT 149348 |||||| || |||||||| |||| ||| | | ||||| | || || | ||||||| Sbjct 150228 CGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGT 150287 Query 149349 TCAATGCCACTGGCAGTGCCGTTAG-TAGAGCTA-ATGCGACTGCCGCGCGCTCGCACTT 149406 | | || ||| | || || | | |||| || | | || |||| | Sbjct 150288 ACTAACCCGTTGGATATACCATTCGTTCCTGCTATATATG--TTCCTTTAGCTCTAATAC 150345 Query 149407 TGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCG 149466 ||||| || | || ||||| ||| | | || ||||| || || | ||| | Sbjct 150346 AATGCACATTAAGACCTATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAG 150405 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | ||| || ||||||||||| ||| | ||| |||||||| ||||| || ||| || Sbjct 150406 TATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTCAGCAGGAAGCAGGACGACAGTT 150465 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGC 149586 | || | || | || || |||||||| || |||||| ||||| ||| || Sbjct 150466 GTGGTCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAG 150525 Query 149587 TCATCATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGC 149644 || || | ||||| ||| | ||| || || ||||| | ||||| ||||| || || Sbjct 150526 ACAGCAAGTTGTACGTCTCAATTGCA-GC-ATCAATGTCTGCACCATGTATGCCGATAGC 150583 Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTA 149704 || ||||| ||||| || || || || || | | || | |||||| | || ||| Sbjct 150584 AACACGCATGAGCATGTGTTGTGGCCGTTCTACAATCTTCCCTTTAATTTTCAACAGGTA 150643 Query 149705 GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 |||||| ||| ||| | || || || ||||| ||||||| ||| ||| Sbjct 150644 TGATCTTTCTAATGTTTTGAAACCGAAATAATTGTAACCAAAGTCACGGTCGT 150696 Score = 123 bits (136), Expect = 2e-23 Identities = 152/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGC 133514 ||| | ||| ||||| ||||| || ||||| || | | | | ||| ||||| ||| Sbjct 36315763 ATGCAGGGTCGACTCCTTCTGGATGTTGTAGTC--CGAAAGGGTACGGCCATCCTCCAGC 36315706 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || |||||||| || || ||||| || |||||||| |||| Sbjct 36315705 TGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATC 36315646 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | ||| | ||||| | ||||| || |||| |||| ||| |||||| Sbjct 36315645 TTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATGGTCTTGCCG 36315586 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||||||||| Sbjct 36315585 GTGAGCGTTTTCACGAAAATCTGCAT 36315560 Score = 120 bits (132), Expect = 3e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| || || ||| ||| || |||||||||| Sbjct 21735291 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGT--ACGTCCGTCTTCCAGCTGCTTGC 21735348 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| |||||||| || || || ||||| |||||||| |||||| || Sbjct 21735349 CGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCT 21735408 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||| || | |||||| || || | ||||| ||| || || || || | Sbjct 21735409 TCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGG 21735468 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 21735469 TTTTGACGAAGATCTGCAT 21735487 >seq2 Length=51801758 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || |||| ||| | ||||| |||||||| || Sbjct 21000407 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGACCA-TCCTCCAGCTGCTTTCC 21000465 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || || || |||||||||||||| |||||| ||| Sbjct 21000466 AGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTTGCCTT 21000525 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||| || | ||||| || || | |||| ||| || || ||||| || Sbjct 21000526 CACGTTCTCAATCGTATCCGATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGT 21000585 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 21000586 CTTCACGAAAATCTGCATG 21000604 Score = 113 bits (124), Expect = 4e-20 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| ||||| ||||| || || |||||| || || ||| |||||| | Sbjct 36664897 AAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGACAGGGT--ACGTCCGTCCTCCA 36664840 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| ||| | || | |||||||| || ||||| ||||| |||||||| || Sbjct 36664839 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGA 36664780 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | ||| | || || | |||||||| || | |||| ||| |||| Sbjct 36664779 TCTTGGCCTTCACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTCTTGC 36664720 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| || || ||||| |||||||| Sbjct 36664719 CAGTCAAGGTCTTCACGAAGATCTGCAT 36664692 >seq3 Length=33601328 Score = 122 bits (134), Expect = 8e-23 Identities = 295/439 (67%), Gaps = 11/439 (3%) Strand=Plus/Minus Query 120453 GCCCAACTGTACGAGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGC 120512 ||||| || || ||||| || ||||| |||||||| ||||||| | ||||| | | ||| Sbjct 22123662 GCCCAGCTCCACCAGCAGCCGATCCGCCACAAACTCGATGTACTGGGACATG-AGTTCGC 22123604 Query 120513 G-TTCATGCCCAGCAACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCA 120571 |||||||||| || | || |||| || || | ||||||| ||| || | | Sbjct 22123603 AATTCATGCCCAACATATCGACTGGCAGTGCTTTGGTCAGGAACTCCTGCTCGATTGCAA 22123544 Query 120572 CCGCCTCCTTGAACATGGCGAGCATAGTGTGGC-CG--GGCATCTTGTGTTCGATGCGCG 120628 |||| ||| || ||| | || | | || || ||| ||| || | ||| | | Sbjct 22123543 CCGCATCCCGGATAATGTCCGTCACACGCTTGCGCGATGGCTTCT-GTATCAGATACTTG 22123485 Query 120629 TTCGGTAGTACAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGT 120688 | || ||||||| ||||| |||| || || |||||||| |||| ||| | Sbjct 22123484 AACATGAG-ACAGGCA----AAGTCGCAATGCAAACCTTCATCGCGCGAGATCAACTCAT 22123430 Query 120689 TGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGC 120748 || ||||||| || ||||| | ||| | |||| | |||| ||||| ||||||| Sbjct 22123429 TGGAGAACGTCAAACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCAAAGC 22123370 Query 120749 TGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCG 120808 |||| ||||| | |||||| || || || || || || |||||| | | | | Sbjct 22123369 TGCCGCTGAAGAAGATGCCCTCGACAGCTGCGAACGCCACGATACGCTCGCCGTAGTTGG 22123310 Query 120809 CCGTCTTGCTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCC 120868 || ||||||| |||||| ||||| ||||| || ||||| ||| ||||||| | Sbjct 22123309 CCTTCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACACACGGCAGCG 22123250 Query 120869 GCTCGAACGCGTTCAGCAG 120887 ||||| || || | ||| Sbjct 22123249 TCTCGATGGCATTGAACAG 22123231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419585405240