Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 1e-18
>seq1
Length=37976048
Score = 109 bits (120), Expect = 1e-18
Identities = 301/461 (65%), Gaps = 3/461 (1%)
Strand=Plus/Minus
Query 110493 GCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCT 110552
|||| |||| | || |||| || | || ||||| || || ||| || |||
Sbjct 150484 GCAGCAACTCAACGACCACAACTGTCGTCCTGCTTCCTGCTGACAATGTCGGACGATAGC 150425
Query 110553 ATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGA 110612
|| || || ||||| ||| |||| ||| | ||| | || |||||| | || ||
Sbjct 150424 ATCGAGGGAATTTACGATACTCTCAAACAGTGTGCATTGATCTCTAAATCGGCCGGTGGC 150365
Query 110613 ATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGT 110672
|| ||| || | || ||| |||| | | |||||| || |||| ||| | |||| |||
Sbjct 150364 ATAGGTCTTAATGTGCATTGTATTAGAGCTAAAGGAACATATATAGCAGGAACGAATGGT 150305
Query 110673 GCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAAT 110732
|| | || | || || ||| | | |||| |||| | || || || ||| |
Sbjct 150304 ATATCCAACGGGTTAGTACCTATGCTGCGTGTCTACAACAATACAGCGCGTTACGTGGAC 150245
Query 110733 CAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGAT 110789
|| |||||||| | || ||| |||||||||| ||| | || || |||||| |||
Sbjct 150244 CAGGGTGGTAACAAGCGACCTGGGGCATTTGCTATTTATTTGGAGCCATGGCATGGGGAT 150185
Query 110790 ATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGAT 110849
|||||||| || || || ||| || || ||| ||||| | || | ||
Sbjct 150184 ATATTTGAGTTTTTGGACCTTAAAAAGAACACGGGAAAAGAAGAGGTCCGCGCTAGAGAC 150125
Query 110850 TTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATG 110909
| || || || |||||||| | ||||| |||||| | ||||| ||| ||| | |||
Sbjct 150124 ATGTTCTACGCTCTGTGGATTCCTGATTTGTTCATGCAGCGTGTCGAAGCAAACGAAATG 150065
Query 110910 TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGA 110950
||| | | ||||| || || || ||||||| | || ||
Sbjct 150064 TGGAGTTTAATGTGCCCCCACGATTGTCCTGGTTTGTCGGA 150024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186809743586161
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |