Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 109 1e-18 >seq1 Length=37976048 Score = 109 bits (120), Expect = 1e-18 Identities = 301/461 (65%), Gaps = 3/461 (1%) Strand=Plus/Minus Query 110493 GCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCT 110552 |||| |||| | || |||| || | || ||||| || || ||| || ||| Sbjct 150484 GCAGCAACTCAACGACCACAACTGTCGTCCTGCTTCCTGCTGACAATGTCGGACGATAGC 150425 Query 110553 ATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGA 110612 || || || ||||| ||| |||| ||| | ||| | || |||||| | || || Sbjct 150424 ATCGAGGGAATTTACGATACTCTCAAACAGTGTGCATTGATCTCTAAATCGGCCGGTGGC 150365 Query 110613 ATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGT 110672 || ||| || | || ||| |||| | | |||||| || |||| ||| | |||| ||| Sbjct 150364 ATAGGTCTTAATGTGCATTGTATTAGAGCTAAAGGAACATATATAGCAGGAACGAATGGT 150305 Query 110673 GCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAAT 110732 || | || | || || ||| | | |||| |||| | || || || ||| | Sbjct 150304 ATATCCAACGGGTTAGTACCTATGCTGCGTGTCTACAACAATACAGCGCGTTACGTGGAC 150245 Query 110733 CAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGAT 110789 || |||||||| | || ||| |||||||||| ||| | || || |||||| ||| Sbjct 150244 CAGGGTGGTAACAAGCGACCTGGGGCATTTGCTATTTATTTGGAGCCATGGCATGGGGAT 150185 Query 110790 ATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGAT 110849 |||||||| || || || ||| || || ||| ||||| | || | || Sbjct 150184 ATATTTGAGTTTTTGGACCTTAAAAAGAACACGGGAAAAGAAGAGGTCCGCGCTAGAGAC 150125 Query 110850 TTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATG 110909 | || || || |||||||| | ||||| |||||| | ||||| ||| ||| | ||| Sbjct 150124 ATGTTCTACGCTCTGTGGATTCCTGATTTGTTCATGCAGCGTGTCGAAGCAAACGAAATG 150065 Query 110910 TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGA 110950 ||| | | ||||| || || || ||||||| | || || Sbjct 150064 TGGAGTTTAATGTGCCCCCACGATTGTCCTGGTTTGTCGGA 150024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186809743586161