Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 102 2e-16 seq1 102 2e-16 >seq2 Length=51801758 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || |||||||| || |||||| |||| || || || || || | || Sbjct 21000588 AAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCGGATACGATTGAGAAC 21000529 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || || ||||| ||| || || || | ||||||||| Sbjct 21000528 GTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAGCAGCGTCTTATCTTC 21000469 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| |||| ||||| | || || |||| |||||| ||||||| |||||| Sbjct 21000468 GCTGGAAAGCAGCTGGAGGATGGTCGCACGCTGTCCGACTACAACATCCAGAAGGAGTCT 21000409 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 21000408 ACGCTGCAC 21000400 >seq1 Length=37976048 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| || || || ||||| | || || || || || Sbjct 21735484 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCGGAT 21735425 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| |||||| || Sbjct 21735424 ACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCAGCAG 21735365 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| ||||||| ||| | || || |||| |||||| || Sbjct 21735364 CGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTACAACATC 21735305 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || |||||||| || Sbjct 21735304 CAGAAGGAGTCGACGCTTCACCTGGT 21735279 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||||||||| || || || ||||| | || || || || ||||| |||| Sbjct 36315575 AAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCATCGGACACCATCGAGAAT 36315634 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || ||||| || || || | || |||||| Sbjct 36315635 GTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAGCAGCGTCTGATCTTC 36315694 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||| ||||| | || | | || |||||| ||||||| ||||| Sbjct 36315695 GCCGGCAAGCAGCTGGAGGATGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCG 36315754 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || ||||| || ||||||| Sbjct 36315755 ACCCTGCATCTTGTACTGCGACTTCG 36315780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817756442121