Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 127 3e-23
seq3 120 4e-21
seq33 118 2e-20
>seq4
Length=34682002
Score = 127 bits (140), Expect = 3e-23
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||||| |||||||| || || |||| |||| ||| ||| |
Sbjct 26230490 ATCTACAAGGTGCTGAAGCAGGTCCATCCGGACACCGG-----CATC-TCCTCGAAGGCG 26230437
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||||||||| || || |||||||| |||| ||||| | | |||||||
Sbjct 26230436 ATGAGCATCATGAACAGCTTCGTGAACGACATCTTCGAGCGCATTGCCGCCGAGGCATCC 26230377
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| ||||||| || ||||||||| |||||| | ||||| ||||| ||||| ||
Sbjct 26230376 CGTCTGGCGCACTACAACAAGCGTTCGACGATCACGTCTCGCGAAATCCAAACCGCTGTC 26230317
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| ||| | ||| ||| || ||||||| |||||||||||| ||||| ||
Sbjct 26230316 CGTCTGCTGTTGCCCGGTGAGCTGGCCAAGCACGCCGTCTCTGAGGGAAC 26230267
Score = 127 bits (140), Expect = 3e-23
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||||| |||||||| || || |||| |||| ||| ||| |
Sbjct 26243926 ATCTACAAGGTGCTGAAGCAGGTCCATCCGGACACCGG-----CATC-TCCTCGAAGGCG 26243979
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||||||||| || || |||||||| |||| ||||| | | |||||||
Sbjct 26243980 ATGAGCATCATGAACAGCTTCGTGAACGACATCTTCGAGCGCATTGCCGCCGAGGCATCC 26244039
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| ||||||| || ||||||||| |||||| | ||||| ||||| ||||| ||
Sbjct 26244040 CGTCTGGCGCACTACAACAAGCGTTCGACGATCACGTCTCGCGAAATCCAAACCGCTGTC 26244099
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| ||| | ||| ||| || ||||||| |||||||||||| ||||| ||
Sbjct 26244100 CGTCTGCTGTTGCCCGGTGAGCTGGCCAAGCACGCCGTCTCTGAGGGAAC 26244149
>seq3
Length=33601328
Score = 120 bits (132), Expect = 4e-21
Identities = 188/265 (71%), Gaps = 3/265 (1%)
Strand=Plus/Plus
Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACT 1455855
||||||| || || || ||||| | ||| |||||||| || |||| | |||
Sbjct 22122871 AGGCCGAAGCTTCTTTCTGGACGGTCGAAGAGGTCGATCTATCTAAGGACATGAAAGACT 22122930
Query 1455856 GGGTGTCGCTGAGCGACGA-CGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGC 1455914
||| |||||| | ||| |||||| || || ||| ||| || |||||||| ||| ||
Sbjct 22122931 GGGATGCGCTGAA-GCCGAGCGAGCGTCACTTTATCTCGCATGTGCTCGCCTTCTTT-GC 22122988
Query 1455915 CGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATT 1455974
|||| |||||| |||||| ||| || |||| || || || | | ||||| || |
Sbjct 22122989 CGCCTCCGATGGTATCGTGAACGAAAATCTGGTCGAACGGTTCAGCCAGGAGGTTCAGGT 22123048
Query 1455975 GCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAAC 1456034
| | ||||| || | || || || ||||||||||| || |||||| | ||| || |
Sbjct 22123049 GACGGAGGCTCGCTGTTTCTATGGTTTCCAGATCGCTATGGAAAACGTGCACAGCGAGAT 22123108
Query 1456035 CTACTCGCTCCTGATCGACACCTAC 1456059
|||||||| || |||||||| |||
Sbjct 22123109 GTACTCGCTGCTTATCGACACATAC 22123133
Score = 114 bits (126), Expect = 2e-19
Identities = 138/183 (75%), Gaps = 11/183 (6%)
Strand=Plus/Plus
Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC--- 1456152
|||||||| ||| |||||| |||| | ||||| |||||||||||||| ||||||
Sbjct 22123240 GCCATCGAGACGCTGCCGTGTGTGAAGCGTAAGGCGGACTGGGCGATGAACTGGATCTCG 22123299
Query 1456153 AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCA 1456211
| |||| ||| | | || | |||||| |||| | || || || ||||||||||
Sbjct 22123300 AGCAAGAAGGCCAACTAC-----GGCGAGCGTATCGTGGCGTTCGCAGCTGTCGAGGGCA 22123354
Query 1456212 TCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCC 1456270
|||| ||| ||||| || ||| |||||||| ||||| |||||||| ||||| |||||
Sbjct 22123355 TCTTCTTCAGCGGCAGCTT-TGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCG 22123413
Query 1456271 GGT 1456273
|||
Sbjct 22123414 GGT 22123416
Score = 107 bits (118), Expect = 3e-17
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 332923 CGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAG 332982
||||||||||||||| || || |||||||| ||| | | ||||||| || ||||||
Sbjct 19919066 CGTGTTGCAGGCCAGCGCGAAGCGCGTCGTGTTGCTGTAGATTTCCATCGTACGCCGGAG 19919125
Query 332983 GGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCG 333042
|||||| ||||| || || | || ||| || |||||||| || | ||||||||| |
Sbjct 19919126 GGCCTGCTGGGCACCCTCGGTCATGCTGTCCGCTTCGTCGAGAATAACGATCTTGTGTCT 19919185
Query 333043 CCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTC 333102
|| ||||||| ||| | | | ||| ||||| | || ||||| || ||
Sbjct 19919186 GCCACGCGGCAGTGTTACCTTCTGCTGGGCAAACATCTTGATTTTGTTCCGCACCACATC 19919245
Query 333103 CACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTC 333144
| || || || | ||| ||||| || ||||||||||| ||
Sbjct 19919246 GATACCCCGTTCATTCGATGCGTTCAGCTCGAGCACGGCTTC 19919287
>seq33
Length=8323
Score = 118 bits (130), Expect = 2e-20
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
||||||||||| || |||||||| ||||| ||| | ||| |||| ||| |
Sbjct 7137 ATCTACAAGGTCCTGAAGCAGGTCCACCCGGACACC-----GGCAT-CTCCTCGAAGGCG 7190
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||||||||| || || |||||||| |||| ||||||| | | |||||
Sbjct 7191 ATGAGCATCATGAACAGCTTCGTGAACGACATCTTCGAGCGCATCGCCGCTGAGGCGTCC 7250
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| |||||| || |||||||||| |||||| | ||||| ||||| ||||||||
Sbjct 7251 CGTTTGGCGCACTACAACAAGCGCTCGACGATCACGTCCCGCGAAATCCAAACCGCCGTC 7310
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| || | ||| || || |||||| ||||||||| |||||||| ||
Sbjct 7311 CGTTTGCTGCTGCCTGGTGAGTTGGCCAAGCACGCCGTTTCCGAGGGAAC 7360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177791813180562
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |