Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 408 6e-109 >seq1 Length=37976048 Score = 408 bits (452), Expect = 6e-109 Identities = 1223/1872 (65%), Gaps = 24/1872 (1%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGG-TGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAG 68432 ||||||||||| | | | | || || || || |||| ||| ||||| || ||||| || Sbjct 148854 GTAAACTGAATCGCATTAACA-GCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTAAG 148912 Query 68433 ACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTAT 68492 || | |||| ||||||||||| || ||||||||| || |||| || |||| Sbjct 148913 GCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTAC 148972 Query 68493 ATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTAT 68552 |||||||| | || || |||||| || || || |||| ||| ||||||||||| || Sbjct 148973 GTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGCCATTTTAAT 149032 Query 68553 AATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAATCTGTTTGATATCATCTGGA 68610 | | || | |||||||| | || || | | || || | || | | ||| Sbjct 149033 GCAAGTTTTCACTGATATTTCCCAGACCGTTTTGTACAGAT-TGCGT-ATGTGTTGCGGA 149090 Query 68611 AGG--CTCG-TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCA 68667 | ||| ||||||| || |||||| | || | || | || || || |||||| Sbjct 149091 ATTTCCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCA 149150 Query 68668 TTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCC 68727 | ||| | | ||| || | | | | || | ||| |||| || | ||||||||| Sbjct 149151 TCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACCACTTGAAATTCT 149210 Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787 || || | ||| ||||| |||| | || || || ||||| | ||| || || || Sbjct 149211 CCTGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTG 149270 Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 68847 || || ||||| ||||| || || ||||||||||| || | | | ||| | | | Sbjct 149271 CCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAA 149330 Query 68848 CCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907 || | || ||||| | || || | ||||| ||| | || | || Sbjct 149331 CCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATTCTGTGGGCTTCCTG 149390 Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAA 68967 | ||| | ||||||||| |||||||| | || | ||||| ||||||||| || Sbjct 149391 TCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCATCATATGTTTCGTAT 149450 Query 68968 GGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCG 69027 || || || | |||| | || || ||||| || | ||| ||| ||||||| ||||| Sbjct 149451 GGACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCA 149510 Query 69028 AAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATA 69087 || || | | ||| | || |||||| ||| || | |||| | | | || Sbjct 149511 AACATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATG 149570 Query 69088 AATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTT 69147 || |||||||||| || || || || ||||| || || | || | | |||| || | Sbjct 149571 AAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGCGCATATTAGATCGC 149630 Query 69148 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACT 69207 | ||||| || | |||||| || || ||||| || ||||| || ||||| || || Sbjct 149631 TTTGCTTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACA 149690 Query 69208 ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TATAACAAACATA 69264 ||| | || |||||||| || ||||| || | ||| | | |||||||| Sbjct 149691 GTTTTGGCTACCTCCTTTAGCTTCGCGAAATCGTATGTACGATCGGGTTTTACAAACATG 149750 Query 69265 TTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA---TATTGT 69321 || || || | || || |||||||| || || | |||| |||| | |||| Sbjct 149751 TTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTCATCT---TTTGAAGAGTATTCC 149807 Query 69322 ATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTT 69381 | || || || || || || ||| ||||| || || | ||||| || ||||||||| Sbjct 149808 ACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTT 149867 Query 69382 TTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATA 69441 || || || || ||||| || || | || ||||| |||| ||| || || || Sbjct 149868 CGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATG 149927 Query 69442 ATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGT--AACGCTTCTCTTTTTCAT 69499 || | ||| | | || || | | ||| || |||| ||| || | Sbjct 149928 ATGGCGAACCACAAATCTTGCGCCTTAAC--CTGTCGCGTGAAACGACCCTCGCGCTCGT 149985 Query 69500 ATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCAT 69559 | || || || || ||| || || ||||| || ||| |||||||| || | Sbjct 149986 AGCCAGTGTAGAGTTTTTGGAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGT 150045 Query 69560 TTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAA 69619 || ||||| || ||||| || | | | || || | ||| || | ||| |||| Sbjct 150046 GGGGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTGCATGAACAAATCAGGAA 150105 Query 69620 TCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAA 69679 |||| ||||| || | ||||| | | ||||| ||||| || || ||||||| Sbjct 150106 TCCACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAA 150165 Query 69680 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCG 69739 | || | |||||| | ||||| ||||||||| || | ||| || || | | || | Sbjct 150166 GGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAG 150225 Query 69740 GTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCG 69799 |||| || || || ||||| || | ||| | || || || || ||||| | |||||| | Sbjct 150226 GTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAG 150285 Query 69800 GAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATAT 69859 | | | || || ||| ||||||| ||||| | ||||| ||||| | || | |||| Sbjct 150286 GTACTAACCCGTTGGATATACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATAC 150345 Query 69860 TACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATG 69919 | | | |||||||| || || ||| ||||||||| | ||||| |||| | | Sbjct 150346 AATGCACATTAAGACCTATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAG 150405 Query 69920 TGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTT 69979 | || || || ||||| |||||||| || ||| | || || || ||| |||| || Sbjct 150406 TATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTCAGCAGGAAGCAGGACGACAGTT 150465 Query 69980 GATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAG 70039 | | || |||| | ||| ||| | || || || ||||| || || || |||| Sbjct 150466 GTGGTCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAG 150525 Query 70040 AAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCG 70098 | |||| ||||| || ||||| || | || || || ||| ||| || || || || Sbjct 150526 ACAGCAAGTTGTACGTCTCAATTGCAGCATCAATGTCTGCACC-ATGTATGCCGATAGCA 150584 Query 70099 ACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTAT 70158 |||||||| | ||| || || || |||||||| | || || ||||||||||||||| Sbjct 150585 ACACGCATGAGCATGTGTTGTGGCCGTTCTACAATCTTCCCTTTAATTTTCAACAGGTAT 150644 Query 70159 GATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATA 70218 ||| |||| | ||||| || || ||||| ||||| |||||| | ||||| || || Sbjct 150645 GATCTTTCTAATGTTTTGAAACCGAAATAATTGTAACCAAAGTCACGGTCGTAGATGATT 150704 Query 70219 ACAGAATTTAGT 70230 ||||||| ||| Sbjct 150705 GCAGAATTAAGT 150716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907074141640