Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 408 6e-109
>seq1
Length=37976048
Score = 408 bits (452), Expect = 6e-109
Identities = 1223/1872 (65%), Gaps = 24/1872 (1%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGG-TGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAG 68432
||||||||||| | | | | || || || || |||| ||| ||||| || ||||| ||
Sbjct 148854 GTAAACTGAATCGCATTAACA-GCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTAAG 148912
Query 68433 ACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTAT 68492
|| | |||| ||||||||||| || ||||||||| || |||| || ||||
Sbjct 148913 GCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTAC 148972
Query 68493 ATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTAT 68552
|||||||| | || || |||||| || || || |||| ||| ||||||||||| ||
Sbjct 148973 GTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGCCATTTTAAT 149032
Query 68553 AATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAATCTGTTTGATATCATCTGGA 68610
| | || | |||||||| | || || | | || || | || | | |||
Sbjct 149033 GCAAGTTTTCACTGATATTTCCCAGACCGTTTTGTACAGAT-TGCGT-ATGTGTTGCGGA 149090
Query 68611 AGG--CTCG-TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCA 68667
| ||| ||||||| || |||||| | || | || | || || || ||||||
Sbjct 149091 ATTTCCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCA 149150
Query 68668 TTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCC 68727
| ||| | | ||| || | | | | || | ||| |||| || | |||||||||
Sbjct 149151 TCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACCACTTGAAATTCT 149210
Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787
|| || | ||| ||||| |||| | || || || ||||| | ||| || || ||
Sbjct 149211 CCTGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTG 149270
Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 68847
|| || ||||| ||||| || || ||||||||||| || | | | ||| | | |
Sbjct 149271 CCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAA 149330
Query 68848 CCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907
|| | || ||||| | || || | ||||| ||| | || | ||
Sbjct 149331 CCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATTCTGTGGGCTTCCTG 149390
Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAA 68967
| ||| | ||||||||| |||||||| | || | ||||| ||||||||| ||
Sbjct 149391 TCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCATCATATGTTTCGTAT 149450
Query 68968 GGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCG 69027
|| || || | |||| | || || ||||| || | ||| ||| ||||||| |||||
Sbjct 149451 GGACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCA 149510
Query 69028 AAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATA 69087
|| || | | ||| | || |||||| ||| || | |||| | | | ||
Sbjct 149511 AACATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATG 149570
Query 69088 AATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTT 69147
|| |||||||||| || || || || ||||| || || | || | | |||| || |
Sbjct 149571 AAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGCGCATATTAGATCGC 149630
Query 69148 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACT 69207
| ||||| || | |||||| || || ||||| || ||||| || ||||| || ||
Sbjct 149631 TTTGCTTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACA 149690
Query 69208 ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TATAACAAACATA 69264
||| | || |||||||| || ||||| || | ||| | | ||||||||
Sbjct 149691 GTTTTGGCTACCTCCTTTAGCTTCGCGAAATCGTATGTACGATCGGGTTTTACAAACATG 149750
Query 69265 TTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA---TATTGT 69321
|| || || | || || |||||||| || || | |||| |||| | ||||
Sbjct 149751 TTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTCATCT---TTTGAAGAGTATTCC 149807
Query 69322 ATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTT 69381
| || || || || || || ||| ||||| || || | ||||| || |||||||||
Sbjct 149808 ACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTT 149867
Query 69382 TTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATA 69441
|| || || || ||||| || || | || ||||| |||| ||| || || ||
Sbjct 149868 CGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATG 149927
Query 69442 ATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGT--AACGCTTCTCTTTTTCAT 69499
|| | ||| | | || || | | ||| || |||| ||| || |
Sbjct 149928 ATGGCGAACCACAAATCTTGCGCCTTAAC--CTGTCGCGTGAAACGACCCTCGCGCTCGT 149985
Query 69500 ATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCAT 69559
| || || || || ||| || || ||||| || ||| |||||||| || |
Sbjct 149986 AGCCAGTGTAGAGTTTTTGGAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGT 150045
Query 69560 TTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAA 69619
|| ||||| || ||||| || | | | || || | ||| || | ||| ||||
Sbjct 150046 GGGGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTGCATGAACAAATCAGGAA 150105
Query 69620 TCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAA 69679
|||| ||||| || | ||||| | | ||||| ||||| || || |||||||
Sbjct 150106 TCCACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAA 150165
Query 69680 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCG 69739
| || | |||||| | ||||| ||||||||| || | ||| || || | | || |
Sbjct 150166 GGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAG 150225
Query 69740 GTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCG 69799
|||| || || || ||||| || | ||| | || || || || ||||| | |||||| |
Sbjct 150226 GTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAG 150285
Query 69800 GAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATAT 69859
| | | || || ||| ||||||| ||||| | ||||| ||||| | || | ||||
Sbjct 150286 GTACTAACCCGTTGGATATACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATAC 150345
Query 69860 TACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATG 69919
| | | |||||||| || || ||| ||||||||| | ||||| |||| | |
Sbjct 150346 AATGCACATTAAGACCTATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAG 150405
Query 69920 TGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTT 69979
| || || || ||||| |||||||| || ||| | || || || ||| |||| ||
Sbjct 150406 TATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTCAGCAGGAAGCAGGACGACAGTT 150465
Query 69980 GATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAG 70039
| | || |||| | ||| ||| | || || || ||||| || || || ||||
Sbjct 150466 GTGGTCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAG 150525
Query 70040 AAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCG 70098
| |||| ||||| || ||||| || | || || || ||| ||| || || || ||
Sbjct 150526 ACAGCAAGTTGTACGTCTCAATTGCAGCATCAATGTCTGCACC-ATGTATGCCGATAGCA 150584
Query 70099 ACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTAT 70158
|||||||| | ||| || || || |||||||| | || || |||||||||||||||
Sbjct 150585 ACACGCATGAGCATGTGTTGTGGCCGTTCTACAATCTTCCCTTTAATTTTCAACAGGTAT 150644
Query 70159 GATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATA 70218
||| |||| | ||||| || || ||||| ||||| |||||| | ||||| || ||
Sbjct 150645 GATCTTTCTAATGTTTTGAAACCGAAATAATTGTAACCAAAGTCACGGTCGTAGATGATT 150704
Query 70219 ACAGAATTTAGT 70230
||||||| |||
Sbjct 150705 GCAGAATTAAGT 150716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686907074141640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |