Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 179 3e-40 seq2 91.5 1e-13 >seq1 Length=37976048 Score = 179 bits (198), Expect = 3e-40 Identities = 1017/1611 (63%), Gaps = 47/1611 (3%) Strand=Plus/Plus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || ||||| || ||||| ||||| |||||||| ||||| ||||||||||| ||| Sbjct 148845 TTGTCAACGGTAAACTGAATCGCATTAACAGCCGGCTTCGTGCGTAAATAATACATCCCT 148904 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTG--GTAATTGG 130523 ||||| || || || || || || || || || | |||| ||| || | Sbjct 148905 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAAT--TGATGTTAGTTTACCGTAGTTTG 148962 Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583 | | || ||| || |||| || ||||||||||||||||| || || | || || | Sbjct 148963 GCTCAGCTACGTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCG 149022 Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642 |||| | | ||| | ||| | | | || ||||| | || ||||| |||| | ||| Sbjct 149023 CCATTTTAATGCAAGTTTTCACTGAT-ATTTCCCAGACCGTTTTGTACAGATTGCGTATG 149081 Query 130643 TGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGC 130702 |||| || || | | || ||| | || |||| ||| | || | ||| | Sbjct 149082 TGTTGCGGAATTTCCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTTC 149141 Query 130703 ATACTTTTATCGTACAA----TCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAAT 130758 || || ||| | | | ||||| || ||||| |||| |||||||| ||| | Sbjct 149142 AT---TTCATCATCCCAGAGCTCCAA-CTCAGTCAGATCCTTTAGCAAATGATGATTCAC 149197 Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818 | |||||| || || | || || | | ||| | ||| ||| ||||||| || Sbjct 149198 CACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAA 149257 Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878 || ||||||||||||| ||||| || || | ||||| ||||| || | || || Sbjct 149258 AGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAG 149317 Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938 |||||||| | ||||| ||| | |||||| ||| | |||| |||||| ||| | Sbjct 149318 CGAATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATTC 149377 Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA 130998 || || || ||| ||||||||| |||| || || ||| | || | || || Sbjct 149378 TGTGGGCTT---CCTGTCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCC 149434 Query 130999 TTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCC 131058 || | | |||||| || || | ||||| ||| ||| ||||| | || || Sbjct 149435 ATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCC 149494 Query 131059 GTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGG 131118 | ||||||||||||| ||||||| |||||| | |||| | || || ||||| Sbjct 149495 GAAATAAATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGG 149554 Query 131119 AAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATG 131178 | ||| || || ||||| ||||| | || || | || | || | ||| | || Sbjct 149555 ATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTG 149614 Query 131179 TTTTAAATTACATTTACGCGAACATTCGGTG---GGATAAAGGTTAATGTCAATTATTTT 131235 | |||| || ||| ||| | | ||||| ||| || || || ||||| Sbjct 149615 GCGCATATTAGAT---CGCTTTGCTTCCGGGACAGGATAGTAGTTGATATCGATGATTTT 149671 Query 131236 GTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCC 131295 ||| | ||| || ||| ||| | || || | || ||||||| | || | Sbjct 149672 GTTCAGATTCCGAGTAACAGTTTTGGCTACCTCCTTTAGCTTCGCGAAATCGTATGTACG 149731 Query 131296 AGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTC 131355 | ||| | |||||||| |||| | || || ||||||||||| || || |||| Sbjct 149732 A---TCGGGTTTTACAAACATGTTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTC 149788 Query 131356 GTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAA 131415 || | | || | |||||||||| ||||| || | ||| || || || | Sbjct 149789 ATCTTTTGAAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAAC 149848 Query 131416 ATTTTGTTGATTGCT-TTTAGCATTCACATGGTCCTTGTACATCATGTAGGGCGTGCCCG 131474 |||||||| || || ||| | | ||| || ||||| | |||||| ||| || | Sbjct 149849 GTTTTGTTGGTTACTCTTTCGATTGCAC-GCATCTTTGTAGAGCATGTAAGGCACTCCAG 149907 Query 131475 TTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATATTT 131532 | || || || | || || ||| |||| | | | | | || | || | Sbjct 149908 TCTCAACCTGCGACTCTATGATG--GCGAACCACAAATCTTGCGCCTTAACCTGTCGCGT 149965 Query 131533 GTATTGGC---CGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGA 131589 | | | | |||| ||||| ||| | ||| || | | || | | Sbjct 149966 GAAACGACCCTCGCG---CTCGTAGCCAGTGTAGAGTTTTTGGAACTCCT---CACCCCA 150019 Query 131590 ACTGTC---CAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTC 131646 | || |||| ||||| ||| ||| ||||||| ||||| |||| ||| Sbjct 150020 TGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAACTCCACATTTCGTTTGCTTC 150079 Query 131647 AACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTT 131706 || |||| ||| |||||||| || | ||| | ||||| |||| |||||||| Sbjct 150080 GACACGCTGCATGAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGAC 150139 Query 131707 CTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGG 131766 ||||||| | ||| | | ||||| | | ||||| || || || ||| ||||||| || Sbjct 150140 CTCTTCTTTTCCCGTGTTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCATGG 150199 Query 131767 TTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAAC 131823 |||||||| | || | ||| || ||| ||||| || || | || | ||| | Sbjct 150200 CTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGCGC 150259 Query 131824 CATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTT 131883 | |||||||| || |||| ||| || | || ||||||| | ||||| || | Sbjct 150260 TGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCCTGC 150319 Query 131884 AATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTT 131943 || || | || || ||||| || || || || || || || || ||| | |||| Sbjct 150320 TATATATGTTCCTTTAGCTCTAATACAATGCACATTAAGACCTATGCCACCGGCCGATTT 150379 Query 131944 AGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994 |||||| | ||| || | | ||||| | || || || || | ||| || Sbjct 150380 AGAGATCAATGCACACTGTTTGAGAGTATCGTAAATTCCCTCGATGCTATC 150430 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| || | ||| || || || || || ||||||||| || | | || || Sbjct 21735273 CGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCG 21735332 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || |||||| | ||||||||||| ||||||||||| | ||||| || Sbjct 21735333 TCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTG 21735392 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| |||| | || | || || | || || || || || || || Sbjct 21735393 TCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATG 21735452 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| || ||||| || ||||| ||||| Sbjct 21735453 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 21735487 >seq2 Length=51801758 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 27029 CAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCG 27088 |||||| | |||||||| | ||| ||| | | ||| ||||||||||| ||| | || Sbjct 21002461 CAACCGGAGCACCAAATGCATCGTTGAGCCATGTTGGATATTGTAGTCAGATATGATACG 21002520 Query 27089 CTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTC 27148 || | || ||||| || |||||| |||| | || || |||||||| | ||||| Sbjct 21002521 ATCATTCTCCAGCTGCTTTCCGGCGAAAATAATCCGTTGCTGATCCGGATCGATGCCCTC 21002580 Query 27149 TTTATCGGCGATCTTGTTTTTCAGGGTTTC---TACAGTGTCTGTGGCTTCAACTTCTAG 27205 || | |||||| |||| | | || ||| || ||||||| |||| ||||| Sbjct 21002581 ACGCTCTTCAATCTTGCTTTTAA---TATCCAATACGGTCTCTGTGGGCACAACATCTAG 21002637 Query 27206 AGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || | ||| || || | ||||| || ||||||||||| Sbjct 21002638 CGTAATCGTTTTCCCGGTTAACGTTTTAACGAAGATTTGCAT 21002679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933359043512