Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 7e-25
>seq1
Length=37976048
Score = 129 bits (142), Expect = 7e-25
Identities = 872/1394 (63%), Gaps = 34/1394 (2%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||||| ||||| |||||| ||||| || | || || || || | |||||| || || ||
Sbjct 149231 GTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGA 149290
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|| |||||||| || || | | || ||||| | ||| | | || ||
Sbjct 149291 AGCGGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTT 149350
Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
||| || || |||| | | | || | | || ||| | |||||||| || | |||
Sbjct 149351 CTTAAGTTCAGCCCAATTCCACAATTCTG-TGGGCTTC-CTGTCCCACATATCGTATTGA 149408
Query 110885 AGCACCCCT-TGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
|| | ||| || | |||| || ||| | ||||| || | ||| | ||||
Sbjct 149409 AGAATTCCTCTGCTAACCGGGCTT-CCATCATATGTTTCGTATGGACCATCAAGCGCAGC 149467
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
||| || ||||| || || || | || ||| ||||||||||| || | ||| |
Sbjct 149468 CAACTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAA 149527
Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063
| || |||||| || ||| | | | ||| ||| || || |||| || | ||
Sbjct 149528 CAACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCC 149587
Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---AC 111120
||| || || | ||| || || | ||| ||||||||||| |||| | || ||
Sbjct 149588 TTGCACTCCGATACCTATCGGACGGTGGCGCATATTAGA---TCGCTTTGCTTCCGGGAC 149644
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
||||| | || | || |||| | ||| ||||| |||||| | || | | ||
Sbjct 149645 AGGATAGTAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACAGTTTTGGCTACCTC 149704
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240
| || || | |||| | || ||| || || ||| || | || |||||
Sbjct 149705 CTTTAGCTTCGCGAAATCGTATGTACGA---TCGGGTTTTACAAACATGTTTAGAGCGAT 149761
Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300
|| |||| ||| || ||||| | ||||| || | ||| || | |||||| || ||
Sbjct 149762 CGAGGCCAGATTACACACAGCAATTTCATCTTTTGAAGAGTATTCCACAATTTCGGTGCA 149821
Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360
| ||| |||| ||| ||||| || | || | |||||||||||| |||||||||||
Sbjct 149822 CAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATC 149881
Query 111361 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAAC 111420
|||||||||||||| ||| || ||||| ||| || | | || || ||| |
Sbjct 149882 TTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGATGGCGAACCACAA 149941
Query 111421 ATC-GGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 111479
||| ||| || | | ||| || || ||||| |||||| ||||||||
Sbjct 149942 ATCTTGCGCCTTAACCTGTCGCG-TGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTT 150000
Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAG 111539
|| |||||||||||| | || || | ||| || | || || || | | |
Sbjct 150001 TTTGGAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAAC 150060
Query 111540 ACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 111599
||| | | | || || |||| |||||| | || ||||||||||| | | |
Sbjct 150061 TCCACATTTCGTTTGCTTCGACACGCTGCATGAACAAATCAGGAATCCACAGAGCGTAGA 150120
Query 111600 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 111659
| | |||||| || ||||||| | || ||| | | || | ||||| |
Sbjct 150121 ACATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAAGGTCCAAAAACTCAA 150180
Query 111660 TGATATCCGCGTGCCATGGCTCAAGATA------GACTGCGATAGATCCCTTTCGACGCC 111713
|||||| | ||||||||||| | ||| | ||| || || ||| | |
Sbjct 150181 ATATATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTA---C 150237
Query 111714 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 111773
|| | || | || || |||||||| ||| | || || ||||| || | | || |
Sbjct 150238 CACCCTGGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGT 150297
Query 111774 CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCA 111833
||| |||||| || || ||| | | || ||||| | | ||| | | |
Sbjct 150298 TGGATATACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATACAATGCACATTAA 150357
Query 111834 TCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATAC 111893
|| || || || ||| | || ||||| ||||||| | ||||| | || || |
Sbjct 150358 GACCTATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAGTATCGTAAATTC 150417
Query 111894 CGTTGATTGAGTCCTCC----TTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 111949
| | ||| || ||| |||| || |||||||| |||| || |||| |
Sbjct 150418 CCTCGATGCTATCGTCCGACATTGTCAGC----AGGAAGCAGGACGACAGTTGTGGTCGT 150473
Query 111950 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTG 112009
| || | ||| || | |||||| | ||||| | || | | |||| | |
Sbjct 150474 TGAGTTGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAGACAGCAAG 150533
Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069
| ||| ||||| | ||| |||||||||| | || || |||||||| || || ||||||
Sbjct 150534 TTGTACGTCTCAATTGCAGCATCAATGTCTGCACCATGTATGCCGATAGCAACACGCATG 150593
Query 112070 AACATGTACTGTGG 112083
| ||||| |||||
Sbjct 150594 AGCATGTGTTGTGG 150607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030422069600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |