Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 129 7e-25 >seq1 Length=37976048 Score = 129 bits (142), Expect = 7e-25 Identities = 872/1394 (63%), Gaps = 34/1394 (2%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||| ||||| |||||| ||||| || | || || || || | |||||| || || || Sbjct 149231 GTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGA 149290 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || |||||||| || || | | || ||||| | ||| | | || || Sbjct 149291 AGCGGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTT 149350 Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 ||| || || |||| | | | || | | || ||| | |||||||| || | ||| Sbjct 149351 CTTAAGTTCAGCCCAATTCCACAATTCTG-TGGGCTTC-CTGTCCCACATATCGTATTGA 149408 Query 110885 AGCACCCCT-TGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 || | ||| || | |||| || ||| | ||||| || | ||| | |||| Sbjct 149409 AGAATTCCTCTGCTAACCGGGCTT-CCATCATATGTTTCGTATGGACCATCAAGCGCAGC 149467 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 ||| || ||||| || || || | || ||| ||||||||||| || | ||| | Sbjct 149468 CAACTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAA 149527 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063 | || |||||| || ||| | | | ||| ||| || || |||| || | || Sbjct 149528 CAACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCC 149587 Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---AC 111120 ||| || || | ||| || || | ||| ||||||||||| |||| | || || Sbjct 149588 TTGCACTCCGATACCTATCGGACGGTGGCGCATATTAGA---TCGCTTTGCTTCCGGGAC 149644 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 ||||| | || | || |||| | ||| ||||| |||||| | || | | || Sbjct 149645 AGGATAGTAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACAGTTTTGGCTACCTC 149704 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240 | || || | |||| | || ||| || || ||| || | || ||||| Sbjct 149705 CTTTAGCTTCGCGAAATCGTATGTACGA---TCGGGTTTTACAAACATGTTTAGAGCGAT 149761 Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300 || |||| ||| || ||||| | ||||| || | ||| || | |||||| || || Sbjct 149762 CGAGGCCAGATTACACACAGCAATTTCATCTTTTGAAGAGTATTCCACAATTTCGGTGCA 149821 Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360 | ||| |||| ||| ||||| || | || | |||||||||||| ||||||||||| Sbjct 149822 CAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATC 149881 Query 111361 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAAC 111420 |||||||||||||| ||| || ||||| ||| || | | || || ||| | Sbjct 149882 TTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGATGGCGAACCACAA 149941 Query 111421 ATC-GGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 111479 ||| ||| || | | ||| || || ||||| |||||| |||||||| Sbjct 149942 ATCTTGCGCCTTAACCTGTCGCG-TGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTT 150000 Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAG 111539 || |||||||||||| | || || | ||| || | || || || | | | Sbjct 150001 TTTGGAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAAC 150060 Query 111540 ACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 111599 ||| | | | || || |||| |||||| | || ||||||||||| | | | Sbjct 150061 TCCACATTTCGTTTGCTTCGACACGCTGCATGAACAAATCAGGAATCCACAGAGCGTAGA 150120 Query 111600 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 111659 | | |||||| || ||||||| | || ||| | | || | ||||| | Sbjct 150121 ACATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAAGGTCCAAAAACTCAA 150180 Query 111660 TGATATCCGCGTGCCATGGCTCAAGATA------GACTGCGATAGATCCCTTTCGACGCC 111713 |||||| | ||||||||||| | ||| | ||| || || ||| | | Sbjct 150181 ATATATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTA---C 150237 Query 111714 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 111773 || | || | || || |||||||| ||| | || || ||||| || | | || | Sbjct 150238 CACCCTGGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGT 150297 Query 111774 CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCA 111833 ||| |||||| || || ||| | | || ||||| | | ||| | | | Sbjct 150298 TGGATATACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATACAATGCACATTAA 150357 Query 111834 TCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATAC 111893 || || || || ||| | || ||||| ||||||| | ||||| | || || | Sbjct 150358 GACCTATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAGTATCGTAAATTC 150417 Query 111894 CGTTGATTGAGTCCTCC----TTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 111949 | | ||| || ||| |||| || |||||||| |||| || |||| | Sbjct 150418 CCTCGATGCTATCGTCCGACATTGTCAGC----AGGAAGCAGGACGACAGTTGTGGTCGT 150473 Query 111950 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTG 112009 | || | ||| || | |||||| | ||||| | || | | |||| | | Sbjct 150474 TGAGTTGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAGACAGCAAG 150533 Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069 | ||| ||||| | ||| |||||||||| | || || |||||||| || || |||||| Sbjct 150534 TTGTACGTCTCAATTGCAGCATCAATGTCTGCACCATGTATGCCGATAGCAACACGCATG 150593 Query 112070 AACATGTACTGTGG 112083 | ||||| ||||| Sbjct 150594 AGCATGTGTTGTGG 150607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030422069600