Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 114 2e-20 >seq1 Length=37976048 Score = 114 bits (126), Expect = 2e-20 Identities = 433/674 (64%), Gaps = 9/674 (1%) Strand=Plus/Plus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| || || || |||| ||||| || | ||||||||| || || || || ||||| Sbjct 149244 GTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATA 149303 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || || | || || ||||| | ||| | ||| || ||| || | || Sbjct 149304 GGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCC 149363 Query 118314 CAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCT-TGG 118370 || | | | || | | | || || | ||||||||| | || || || ||| || Sbjct 149364 CAATTCCACAATTCTG--TGGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGC 149421 Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 118430 | | ||| ||| ||| |||| || ||||| || |||| | | ||||| ||| |||| Sbjct 149422 TAACCGGGCT-TCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTT 149480 Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490 || || || || || ||| || |||||||| || | ||| | || ||| || Sbjct 149481 GCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCT 149540 Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 || ||| | | | || ||| || || |||| || | ||||| || |||| Sbjct 149541 TCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATA 149600 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 || || || || || | ||||||||| | || | || ||||| | || || Sbjct 149601 CCTATCGGACGGTGGCGCATATTAGATCGCTTTGCTTCCGGGACAGGATAGTAGTTGATA 149660 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 118670 ||||| | | || ||||| || ||| || | | || | ||||| || || Sbjct 149661 TCGATGATTTTGTTCAGATTCCGAGTAACAGTTTTGGCTACCTCCTTTAGCTTCGCGAAA 149720 Query 118671 TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 118730 || | | ||| || || ||| || | || ||||| || |||||||||||| Sbjct 149721 TCGTATGTACGA---TCGGGTTTTACAAACATGTTTAGAGCGATCGAGGCCAGATTACAC 149777 Query 118731 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTA 118790 |||| | ||||| || || ||| || | |||||| ||||||| |||||||| ||| Sbjct 149778 ACAGCAATTTCATCTTTTGAAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACACTTG 149837 Query 118791 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 118850 || || || | ||| | ||| || |||| || |||||||| ||||| |||||||| Sbjct 149838 ATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATCTTTGTAGAGCATGTAA 149897 Query 118851 GGCGTCCCCGTCTC 118864 ||| || ||||| Sbjct 149898 GGCACTCCAGTCTC 149911 Score = 96.9 bits (106), Expect = 4e-15 Identities = 287/432 (66%), Gaps = 12/432 (3%) Strand=Plus/Plus Query 178885 CCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 178944 ||||| ||||| ||||||| |||||||| || | ||| |||| | |||| ||| || Sbjct 21028606 CCCGTTCCGATACCTTCGGCACCGTTCACCAGCAACATCGGAATGATGGGCAGATACCAG 21028665 Query 178945 TCTGGTTCAATCGCAC-GCCCGTCATCATCCAAATAATTGAGCACGGGGTCGTCCCTCGG 179003 ||||| || || | | ||| || | | || | ||||| |||||||| ||| Sbjct 21028666 ATCGGTTCGAT-GCGCTGGTTGTCCTCGTACTGGTACTCGAGCAGCGGGTCGTCGAGCGG 21028724 Query 179004 ATCAAAGATTTTACGAGCATCCCTGGTGA--GTTTTGTGAAGATGTACCTCGTTTGAGAC 179061 || ||||| | | || || || || | | ||||||||||| | || || | Sbjct 21028725 ATGGAAGATG--AGGCGCGTCAGTGACGAAAGCATGGTGAAGATGTAACGCGGGCTAG-C 21028781 Query 179062 GCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGAT 179120 || || ||||| ||| | | ||||| ||||| ||||| | || | || |||||||| Sbjct 21028782 GCTGTCCTTGCCGCCCGTCAACCGCGTACCAAACTGACCGCCCGGGTACAGCAGATTGAT 21028841 Query 179121 ATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACT-- 179178 ||||| || | ||| | ||||| |||| || || | || | | |||| Sbjct 21028842 GTTGTTGCTGCCGACAAAGTTCTGGGCCAGATTGATGATGGTG-CTGC-ACAGCGACTGC 21028899 Query 179179 TCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATC 179238 || || ||||||||||| ||| | |||||||| | | |||| ||| |||||||| | | Sbjct 21028900 TCGCCATGATGGTAAGCGGACATTTCCGCCACCGAACCGGCCAGCTGGGCCACCTTTACC 21028959 Query 179239 TCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGAGG 179298 || ||| ||| | |||||||| | ||| |||||| | || ||||| || Sbjct 21028960 TCGCGCTTATCGTTACGCTTGAAGCACGTAAACAGCACCTTACGCTGGCCCGGCTTCAGC 21029019 Query 179299 CCGTCGGCCATG 179310 || ||| |||| Sbjct 21029020 CCATCGAGCATG 21029031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433646181560