Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 159 4e-34 >seq1 Length=37976048 Score = 159 bits (176), Expect = 4e-34 Identities = 882/1396 (63%), Gaps = 40/1396 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| ||||| ||||||| || || ||||| || ||||| | |||||||||| ||| Sbjct 150607 CCACAACACATGCTCATGCGTGTTGCTATCGGCATACATGGTGCAGACATTGATGCTGCA 150548 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || | |||| | | || | ||||| | |||||| | || Sbjct 150547 ATTGAGACGTACAACTTGCTGTCTGAGCGATACTTTACGCACGCCTCGCCAACCATGTTT 150488 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA----GGA 104397 ||| | || | | |||| ||| |||| |||||||| || |||| ||| Sbjct 150487 GCTGCAGCAACTCAACGACCACAACTGTCGTCCTGCTTCCT----GCTGACAATGTCGGA 150432 Query 104398 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 104457 || ||| | || || || | ||||| | ||||||| ||||| || | ||| Sbjct 150431 CGATAGCATCGAGGGAATTTACGATACTCTCAAACAGTGTGCATTGATCTCTAAATCGGC 150372 Query 104458 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGAC 104517 || || || || | | | ||| | | ||||| || | | ||| || || Sbjct 150371 CGGTGGCATAGGTCTTAATGTGCATTGTATTAGAGCTAAAGGAACATATATAGCAGGAAC 150312 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 |||||| ||| | || | | || ||||| || || | ||| |||||||| || Sbjct 150311 GAATGGTATATCCAACGGGTTAGTACCTATGCTGCGTGTCTACAACAATACAGCGCGTTA 150252 Query 104578 TGTAAATCAAGCTGGGCGTCGAAAGGGATCTATCGCAGTC------TATCTTGAGCCATG 104631 || | || | ||| | ||| || || ||| | ||| | |||||||| Sbjct 150251 CGTGGACCAGGGTGG---TAACAAGCGACCTGGGGCATTTGCTATTTATTTGGAGCCATG 150195 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CG 104689 ||| | |||||| | ||||| | || | ||| || | || |||| || Sbjct 150194 GCATGGGGATATATTTGAGTTTTTGGACCTTAAAAAGAACACGGGAAAAGAAGAGGTCCG 150135 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || | | || | |||| |||||| |||||||| ||| | |||||| || | || || Sbjct 150134 CGCTA--GAGACATGTTCTACGCTCTGTGGATTCCTGATTTGTTCATGCAGCGTGTCGAA 150077 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 | | | | ||| | | | || || || | |||||| | || || | | Sbjct 150076 GCAAACGAAATGTGGAGTTTAATGTGCCCCCACGATTGTCCTGGTTTGTCGGAGACATGG 150017 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869 ||||||||||| || || ||||| |||||| || ||||| || ||||| Sbjct 150016 GGTGAGGAGTTCCAAAAACTCTACACTGGCTACGAGCGCGAGGGTCGTTTCAC-GCGACA 149958 Query 104870 GTGCCAGCTGCC-GATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | || || ||| ||||| || || | |||| || |||||||| || Sbjct 149957 GGTTAAGGCGCAAGATTTGTGGTTCGCCATCATAGAGTCGCAGGTTGAGACTGGAGTGCC 149898 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 |||||||| |||||||| || || || | ||||||||| ||| | || | || ||| Sbjct 149897 TTACATGCTCTACAAAGATGCGTGCAATCGAAAGAGTAACCAACAAAACGTTGGAACGAT 149838 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 |||| |||| || || || || ||||| |||||| | |||||||| | ||||| Sbjct 149837 CAAGTGTTCAAACCTGTGCACCGAAATTGTGGAATACTCTTCAAAAGATGAAATTGCTGT 149778 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGA 105108 |||||| || || || |||||||| || || ||| | || || |||| || Sbjct 149777 GTGTAATCTGGCCTCGATCGCTCTAAACATGTTTGTAAAACCCGA---TCGTACATACGA 149721 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 || | || || | || || | |||||||| || || || |||| | | || || Sbjct 149720 TTTCGCGAAGCTAAAGGAGGTAGCCAAAACTGTTACTCGGAATCTGAACAAAATCATCGA 149661 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 || || | || || || | || |||||||||| | |||||||| || || Sbjct 149660 TATCAACTACTATCCTGTCCCGGAAGCAAAGCGATCTAATATGCGCCACCGTCCGATAGG 149601 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATTTGATTCCG 105287 | |||| || || || | || |||| |||| |||| | ||||| | | ||| | Sbjct 149600 TATCGGAGTGCAAGGCATGGCAGATGCTTTCA-TCTTGATGCGCCATCCTTATGAAAGTG 149542 Query 105288 ACGAAGCGAAG----GAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTT 105343 | ||||| || ||||||| | || ||||| ||||| ||| || || ||| Sbjct 149541 AAGAAGCCCAGTTGTTAAATCAA----CAAATGTTTGAAACCATTTATTTCGGGGCACTT 149486 Query 105344 GAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 105403 || || || | |||||||| | | ||||||||||||| ||||| | ||| || || Sbjct 149485 GAAGCAAGCTGCGAGTTGGCTGCGCTTGATGGTCCATACGAAACATATGATGG-AAGCCC 149427 Query 105404 GCTTCACA-AGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACTACG 105461 | || || ||| | ||||||| ||||||||||| | || ||| || | | Sbjct 149426 GGTTAGCAGAGGAATTCTTCAATACGATATGTGGGACAGGAAGCCCACAGAAT-TGTGGA 149368 Query 105462 ACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGG 105521 | |||| | || ||| || || | | ||| | ||||| || || | | Sbjct 149367 ATTGGGCTGAACTTAAGAAAAAAATTGCTACGTACGGTTTGCGTAATTCGCTGCTACTAG 149308 Query 105522 CTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 105581 |||| |||||||| || || || || |||||| | || || || || | || ||||| | Sbjct 149307 CTCCTATGCCAACCGCTTCGACTGCCCAAATCCTCGGCAACAACGAGTCTTTCGAACCGT 149248 Query 105582 ACACGACGAACATCTA 105597 |||| | ||| |||| Sbjct 149247 ACACATCAAACGTCTA 149232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259334557240