Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3 462 7e-125 seq2 163 9e-35 seq1 156 1e-32 seq4 84.2 7e-11 >seq3 Length=33601328 Score = 462 bits (512), Expect = 7e-125 Identities = 854/1244 (69%), Gaps = 24/1244 (2%) Strand=Plus/Minus Query 349475 GACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC 349534 |||| || |||||| | | | || ||||| || || || | ||| ||||| || Sbjct 573468 GACGCTGGTAAACCGAAGCTACAAGTGGAATACAAGGGCGAGAAGAAATCGTTTTTTCCA 573409 Query 349535 GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGT 349594 |||||| | ||||||||||| | |||||||||||||| ||||||||| || | || Sbjct 573408 GAAGAAGTCTCATCAATGGTGCTTACTAAAATGAAGGAAACTGCTGAAGCTTACCTTGG- 573350 Query 349595 GAAACAGTAA--CTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTT 349652 ||| | || | |||| ||||| || ||||| || || ||||||||| | |||||| Sbjct 573349 -AAAGAATATTGCAAATGCGGTTATAACAGTACCTGCGTACTTTAATGATTCTCAGCGTC 573291 Query 349653 CTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAAC 349712 || ||||| ||||| || ||||| || |||||||| | | || || ||||||| Sbjct 573290 AGGCCACAAAGGATGCAGGTGCAATTGCTGGTTTAAATGTGTTGCGTATCATCAATGAAC 573231 Query 349713 CCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTC 349772 | || ||||| ||||||||||| ||| | || |||| ||| ||| ||| ||| Sbjct 573230 CGACAGCTGCTGCAATTGCATACGGGTTGGACAAAACAGGTGTTGGAGAGCGGAATGTTC 573171 Query 349773 TTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAA 349832 |||| ||||| | || || ||||| || || || || | || | |||| || || | Sbjct 573170 TTATCTTTGACCTCGGCGGCGGTACCTTCGACGTTTCTATCCTCGCCATTGAGGACGGCA 573111 Query 349833 TTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATC 349892 ||||||| || ||| | ||||| || ||||||||| | || ||||||||||| ||||| | Sbjct 573110 TTTTTGAGGTCAAATCTACTGCAGGCGATACACATTTGGGAGGAGAAGATTTCGATAACC 573051 Query 349893 GTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATAT-TGGA--G 349949 | | ||||| |||||||| |||| ||||| ||| | ||| | || || | || Sbjct 573050 GAATGGTTTCACATTTTGTGGAAGAGTTTAAACGTAAGAATAAGAAGGACATCTCGACCA 572991 Query 349950 ATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTAT 350009 | || | ||||| ||||||| ||| | || || || ||||| || ||||| | || | Sbjct 572990 ACAAGC---GAGCATTGCGTCGTCTACGTACGGCATGCGAACGAGCGAAGCGCACTTTGT 572934 Query 350010 CATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTT 350069 || | | ||||| | |||||||| ||||| ||| || || | ||||||| | Sbjct 572933 CAGCATCAACCCAGGCAAGCATTGAAATCGATTCGCTTTTCGAAGGGATTGATTTCTATA 572874 Query 350070 CATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGG 350129 | ||||| || | || || ||||||||| | ||| | || | | ||||||| Sbjct 572873 CTTCTATAACGAGGGCACGTTTTGAAGAACTCAACTCAGATTTGTTCCGCGACACAATGG 572814 Query 350130 ATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAG 350189 | || |||| |||| |||| |||||| || ||| ||| | | || | || ||| Sbjct 572813 AGCCAGTGGCTAAAGCATTACGAGATGCCAAGATGGATAAAGGTAATATACACGATATAG 572754 Query 350190 TTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCT----GAGTTT 350245 |||| |||||||| || || || ||||| ||||| |||| ||| ||| || || Sbjct 572753 TTTTGGTTGGTGGATCCACTCGGATTCCGAAAGT---ACAGAAACT-TCTGCAGGATTTC 572698 Query 350246 TTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCT 350305 |||||||| ||||| | ||| || || || || |||||||| |||||||| ||| Sbjct 572697 TTTAATGGGAAAGAGTTGAACAAATCCATCAACCCCGACGAAGCTGTCGCATATGGCGCT 572638 Query 350306 GCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAA---AATTGATGATCTATTA 350362 || || || || | || ||| ||| | | || | | | ||| || | Sbjct 572637 GCAGTGCAAGCGGCAATCTTACAAGGA---GACACATCGGAGGCGGTGCAGGATTTACTT 572581 Query 350363 CTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTT 350422 | || ||||| || ||||| ||| | ||| | ||||| | || | ||| ||||| ||| Sbjct 572580 TTGCTGGATGTTACACCACTGTCGTTAGGAATCGAAACGGCCGGAGGAGTCATGACCGTT 572521 Query 350423 CTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCA 350482 || || |||||| ||| |||| || || | ||||||| || |||||| | Sbjct 572520 CTGATCAAGCGAAATACCACTATACCGACGAAGCAAACCCAAACATTCACTACATACTCG 572461 Query 350483 GATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGAT 350542 || ||||| || | ||| |||||||||||||||||| ||||| ||| || ||||| Sbjct 572460 GACAATCAACCTGGGGTTCTAATTCAAGTATTTGAAGGAGAACGCGCTATGACGAAAGAC 572401 Query 350543 AATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCT 350602 || ||| ||||| ||||| || |||| |||||||| || | ||||| || Sbjct 572400 AACAATCTTCTTGGTAAATTTGAACTCAGTGGTATTCCACCCGCTCCACGTGGAGTACCG 572341 Query 350603 CAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAA 350662 |||||||| ||| | |||||||||||| | || ||||| | ||||| | || |||| Sbjct 572340 CAGATTGAGGTCACATTCGATATTGATGCTAACGGTATCATGAATGTATCTGCTATTGAG 572281 Query 350663 AAATCAAGTGGTAAAAGTAGTAAGGTAGAAATTACTAATGATAA 350706 ||||| | | ||| | | | || ||||||||| ||||| Sbjct 572280 AAATCGACTAACAAAGAAAATCGGATAACAATTACTAACGATAA 572237 Score = 275 bits (304), Expect = 2e-68 Identities = 606/898 (67%), Gaps = 8/898 (1%) Strand=Plus/Plus Query 182897 AGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGATAC 182956 ||| ||||| |||| || ||||| | ||||| |||| |||| ||| |||| || Sbjct 572272 AGTCGATTTCTCAATAGCAGATACATTCATGATACCGTTAGCATCAATATCGAATGTGAC 572331 Query 182957 TTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAA 183016 |||||||| || || || ||||| |||||||| ||| | | ||||| ||| | Sbjct 572332 CTCAATCTGCGGTACTCCACGTGGAGCGGGTGGAATACCACTGAGTTCAAATTTACCAAG 572391 Query 183017 TTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGG 183076 ||| || ||||| || | || | || |||||| |||||||||| ||| | || Sbjct 572392 AAGATTGTTGTCTTTCGTCATAGCGCGTTCTCCTTCAAATACTTGAATTAGAACCCCAGG 572451 Query 183077 CTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCG 183136 ||||| || || |||| || ||| ||| || | || ||||| | |||||| Sbjct 572452 TTGATTGTCCGAGTATGTAGTGAATGTTTGGGTTTGCTTCGTCGGTATAGTGGTATTTCG 572511 Query 183137 CGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTAC 183196 | | | || ||||| ||| ||| ||| ||||| | |||||| || | ||||| || Sbjct 572512 CTTGATCAGAACGGTCATGACTCCTCCGGCCGTTTCGATTCCTAACGACAGTGGTGTAAC 572571 Query 183197 ATCTAGTAATAATAAATCTGATGTTTTATCTGATTTAATATCACT-TAAAATTGCAGCTT 183255 ||| || || | |||||| || ||| | | || | ||| ||||| |||| Sbjct 572572 ATCCAGCAAAAGTAAATCCTGCACCGCCTCCGATGTG-TCTCCTTGTAAGATTGCCGCTT 572630 Query 183256 GAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGC 183315 | || || || |||||||| |||||||| || ||||| || || || ||||| | Sbjct 572631 GCACTGCAGCGCCATATGCGACAGCTTCGTCGGGGTTGATGGATTTGTTCAACTCTTTCC 572690 Query 183316 CATTAAA-AAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACT 183374 ||||||| |||| ||| | | | || || | ||| ||||| | ||| || ||||| || Sbjct 572691 CATTAAAGAAATCCTGCA-GAAGTTTCTGTACTTTCGGAATCCGAGTGGATCCACCAACC 572749 Query 183375 AATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACA 183434 || |||| || | ||||||| |||| || | | |||| ||| |||| | || Sbjct 572750 AAAACTATATCGTGTATATTACCTTTATCCATCTTGGCATCTCGTAATGCTTTAGCCACT 572809 Query 183435 GGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAA 183494 || ||||| || | | || |||||| | ||||| || | ||| || |||| | Sbjct 572810 GGCTCCATTGTGTCGCGGAACAAATCTGAGTTGAGTTCTTCAAAACGTGCCCTCGTTATA 572869 Query 183495 GATGaaaaaaaGTCAATACCATTATATAAG-GAATCAATTTCAATCGATGTTTGTGTAGA 183553 || | | | || ||||| || || | ||| ||||| |||||||| || || || || Sbjct 572870 GAAGTATAGAAATCAATCCC-TTCGAAAAGCGAATCGATTTCAATGCTTGCCTGGGTTGA 572928 Query 183554 TGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCT-TG 183612 || ||| || || | || |||||||| ||||| || | ||| ||||| |||| || | Sbjct 572929 TGCTGACAAAGTGCGCTTCGCTCGTTCGCATGCCGTACGTAGACGACGCAATGCTCGCTT 572988 Query 183613 GATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTA 183672 | | || | || || | |||| || | |||||| || | ||||||| || | Sbjct 572989 GTTGGTC-GAGATGTCCTTCTTATTCTTACGTTTAAACTCTTCCACAAAATGTGAAACCA 573047 Query 183673 ATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAA 183732 || |||| |||||||| || || |||||||||||||| ||||||| ||| || |||| Sbjct 573048 TTCGGTTATCGAAATCTTCTCCTCCCAAATGTGTATCGCCTGCAGTAGATTTGACCTCAA 573107 Query 183733 ATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 | || ||||| ||||| | || || || || || ||||| || || | ||||| Sbjct 573108 AAATGCCGTCCTCAATGGCGAGGATAGAAACGTCGAAGGTACCGCCGCCGAGGTCAAA 573165 Score = 107 bits (118), Expect = 6e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||||| || || || ||||| ||||| | || | || ||| || || Sbjct 573814 GGCATTGATTTGGGGACGACGTATTCGTGTGTAGGAGTGTTCCAGCATGGAAAGGTTGAT 573755 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || || || ||||||||||| || |||| || ||||| ||||| || |||||||| || Sbjct 573754 ATTATCGCGAATGATCAAGGCAATCGAACCACACCATCTTACGTGGCGTTTACCGATACC 573695 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 ||||| | ||||||||| | || |||||||||| || |||||||| ||||| || Sbjct 573694 GAGCGACTTATTGGTGATGCAGCCAAAAATCAAGTAGCAATGAATCCAAATAATACTATT 573635 Query 349385 TTTG 349388 |||| Sbjct 573634 TTTG 573631 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 6084325 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 6084266 Query 235950 CCCAGCATCTCCAT 235963 ||| |||||||||| Sbjct 6084265 CCCGGCATCTCCAT 6084252 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2296144 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2296085 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 2296084 CCCGGCATCTCCA 2296072 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 6019027 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 6018968 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 6018967 CCCGGCATCTCCA 6018955 >seq2 Length=51801758 Score = 163 bits (180), Expect = 9e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 140505 TACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAA 140564 ||||| |||||||| | | ||| || | || || |||||||| || || || || || Sbjct 21000371 TACATTCCACCACGCAGACGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAG 21000430 Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 || || | || || ||||| || || || |||||||| ||||| ||||| |||||||| Sbjct 21000431 TCGGACAGCGTGCGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCT 21000490 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || ||||| ||||| || |||||||| || || || || || ||||||| ||| ||||| Sbjct 21000491 GGGGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGC 21000550 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | |||||||| || || || || || ||||||||||| Sbjct 21000551 TCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 21000603 Score = 150 bits (166), Expect = 5e-31 Identities = 526/813 (65%), Gaps = 20/813 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || || || || || |||| ||| | || ||| Sbjct 25592432 GCAATCGGAATCGATCTGGGCACCACGTACTCCTGCGTTGGTGTGTTCCAGCATGGAAAG 25592373 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || ||||| || || || ||| |||| || || ||||| || || | Sbjct 25592372 GTTGAGATCATCGCAAACGACCAGGGCAACCGAACGACACCGAGCTACGTCGCGTTCTCG 25592313 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| | || || ||| | || || ||||| | || ||||| | || Sbjct 25592312 GACACAGAGCGACTCATCGGAGATGCAGCCAAGAATCAGGTGGCCATGAATCCGACTAAC 25592253 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTT-----TCTGACAAATCTACAC 349433 ||||| || ||||| |||||||| ||||| | | || || || | ||| | Sbjct 25592252 ACGGTGTTCGATGCCAAGCGACTGATTGGACGCAAATTCGACGATCCGA-AGATC----C 25592198 Query 349434 AATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTA 349493 || | ||| | || || | || || || || || ||| ||||||| ||| || | | Sbjct 25592197 AAGCCGATATGAAGCACTGGCCATTCACGGTGGT---AAATGACGGTGGTAAGCCCAAGA 25592141 Query 349494 TTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGG 349553 | || || | || || |||| ||| ||| || || ||||| || |||| Sbjct 25592140 TCCGCGTCGAGTTCAAGGGCGAACGCAAAACCTTTGCCCCGGAGGAAATCAGTTCGATGG 25592081 Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 | | || |||||||||| || ||||| || | || | |||||| |||| | Sbjct 25592080 TGCTGACGAAGATGAAGGAAACCGCCGAAGCCTACCTGGGCCAGTCAGTAAAAAATGCAG 25592021 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 | || || ||||||||||| || || || |||||| || ||||| |||||||| Sbjct 25592020 TCATCACAGTACCAGCCTACTTCAACGACAGCCAGCGACAGGCCACAAAGGATGCTGGAG 25591961 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 ||| || || || ||||| | | || || || ||||| || || ||||| | || | Sbjct 25591960 CCATCGCTGGCTTGAATGTGATGCGCATCATCAACGAACCGACGGCGGCAGCTCTGGCGT 25591901 Query 349734 ATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTG 349793 |||| | ||||| | | |||| ||| |||| || || ||| | ||||| | Sbjct 25591900 ATGGCTTGGATAAGAACCTAAAGGGAGAACGCAATGTTCTGATCTTCGATCTGGGTGGCG 25591841 Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAAGTTAAAGCAA 349850 | || || || || || | || || | || ||||| | | ||||| || | | | Sbjct 25591840 GCACCTTCGACGTGTCCATTCTGACGATCGACGAGGGATCACTGTTTGAGGTACGATCCA 25591781 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTG 349910 | || || ||||| ||| | || || ||||| || ||||| || | || || || | Sbjct 25591780 CGGCCGGAGATACTCATTTGGGAGGCGAAGACTTCGATAACCGAATGGTGGGCCACTTCG 25591721 Query 349911 TTAAAGAATTTAAGCGTCAAGC-TAAAATTGATAT-TGGAGATAATCCTAGAGCAATGCG 349968 | ||||||| || || |||| || | ||| | | || | || || | || |||| Sbjct 25591720 TGGAAGAATTCAAACG-AAAGCACAAGAAGGATCTGTCGA-AGAACGCTCGCGCTCTGCG 25591663 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCG 350001 ||| | ||||| ||||| ||| | || ||||| Sbjct 25591662 TCGTTTGAGAACGGCGTGCGAAAGGGCGAAGCG 25591630 Score = 122 bits (134), Expect = 3e-22 Identities = 518/810 (64%), Gaps = 14/810 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || ||||||||| | || || || || || || |||| ||| | || ||| Sbjct 25596233 GCAATCGGAATCGATCTGGGCACCACGTACTCCTGCGTTGGTGTGTTCCAGCATGGAAAG 25596292 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || ||||| || || || ||| |||| || || ||||| || || | Sbjct 25596293 GTGGAGATCATCGCAAACGACCAGGGCAACCGAACGACACCGAGCTACGTCGCGTTCTCG 25596352 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| | || || ||| | || || || || | || ||||| | || Sbjct 25596353 GACACGGAGCGCCTCATCGGAGATGCAGCCAAGAACCAGGTGGCCATGAATCCGACCAAC 25596412 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAAT 349436 ||||| |||||||| ||||| || ||||| | | || ||| | || | || Sbjct 25596413 ACGGTGTTTGATGCCAAGCGGCTGATTGGACGCAAATTCGATGATCCGAAGATCCAGG-- 25596470 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 | ||| | || || | || || || || || || || | | ||||| | || Sbjct 25596471 CCGATATGAAGCACTGGCCATTCACGGTGGTG---AACGATTGCGGCAAACCCAAGATCC 25596527 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 || || | || || || | ||| ||| ||||| ||||| || ||||| Sbjct 25596528 GCGTCGAGTTCAAGGGCGAGCGCAAAACCTTTGCCCCCGAGGAAATCAGTTCGATGGTGC 25596587 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || |||||||||| || ||||| || | || | |||||| |||| || | Sbjct 25596588 TGACGAAGATGAAGGAAACCGCCGAAGCCTACCTGGGCCAGTCAGTAAAAAATGCAGTCA 25596647 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || ||||||||||| || || || |||||| || ||||| |||||||| || Sbjct 25596648 TCACAGTACCAGCCTACTTCAACGACAGCCAGCGACAGGCCACAAAGGATGCTGGAGCCA 25596707 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | ||||| | | || || || ||||| || || ||||| | || |||| Sbjct 25596708 TCGCTGGACTGAATGTGATGCGCATCATCAACGAACCGACGGCAGCAGCTCTGGCGTATG 25596767 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | | ||||| | | |||| ||| |||| || || ||| | || || || | Sbjct 25596768 GCTTGGATAAGAACCTAAAGGGAGAACGCAATGTTCTGATCTTCGATCTGGGAGGCGGCA 25596827 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAAGTTAAAGCAACTG 349853 | || || || || | || || | || ||||| | | ||||| || | | || | Sbjct 25596828 CCTTCGACGTGTCCATTCTGACGATCGACGAGGGATCACTGTTTGAGGTACGATCCACGG 25596887 Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTA 349913 | || ||||| ||| | || || ||||| || ||||| || | || || || || Sbjct 25596888 CCGGAGATACTCATTTGGGAGGCGAAGACTTCGATAACCGAATGGTGGGCCACTTCGTGG 25596947 Query 349914 AAGAATTTAAGCGTCAAGC-TAAAATTGATAT-TGGAGATAATCCTAGAGCAATGCGTCG 349971 ||||||| || || |||| || | ||| | | || | ||| | |||| |||| || Sbjct 25596948 AAGAATTCAAACG-AAAGCACAAGAAGGATCTGTCGA-AGAATGCCCGAGCCCTGCGGCG 25597005 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCG 350001 | ||||| || |||||||| || ||||| Sbjct 25597006 TTTGAGAACGGCATGTGAACGGGCAAAGCG 25597035 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 30448913 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 30448972 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 30448973 CCCGGCATCTCCA 30448985 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 30450770 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 30450711 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 30450710 CCCGGCATCTCCA 30450698 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 36940270 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 36940211 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 36940210 CCCGGCATCTCCA 36940198 >seq1 Length=37976048 Score = 156 bits (172), Expect = 1e-32 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 140505 TACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAA 140564 ||| |||||||||| | || || |||||||| || || ||||| || || || || || Sbjct 36315792 TACGTACCACCACGAAGTCGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAG 36315733 Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 || || | || || ||||| || || || || || || ||||| ||||| |||||||| Sbjct 36315732 TCCGAAAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCT 36315673 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || || ||||| || || ||||| || || || || ||||| || || | || ||||| Sbjct 36315672 GGGGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGC 36315613 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || ||||| | ||||| ||||| || ||||| || |||||||||||| Sbjct 36315612 TCGACCTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATT 36315559 Score = 96.9 bits (106), Expect = 1e-14 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 3555502 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 3555443 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 3555442 CCCGGCATCTCCA 3555430 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 3032099 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 3032158 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 3032159 CCCGGCATCTCCA 3032171 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 3351195 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 3351136 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 3351135 CCCGGCATCTCCA 3351123 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 23418228 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 23418287 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 23418288 CCCGGCATCTCCA 23418300 >seq4 Length=34682002 Score = 84.2 bits (92), Expect = 7e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 235877 TCGTTCAATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGT 235936 || ||| || | ||||| ||||| |||| ||||||| ||||||||| ||||||||||||| Sbjct 20717633 TCTTTCCATCTCGGGGG-TGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGT 20717575 Query 235937 ACCGGGATCAAAACCCAGCATCTCCA 235962 || ||||| | || |||||||||| Sbjct 20717574 ACTAGGATCGACGCCTAGCATCTCCA 20717549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515250497746403