Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 8e-24
seq3 86.0 7e-12
>seq1
Length=37976048
Score = 125 bits (138), Expect = 8e-24
Identities = 459/702 (65%), Gaps = 24/702 (3%)
Strand=Plus/Minus
Query 53242 TGAGACGTACGACTTAATG----AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGT 53297
|||||||||| |||| || ||| | ||||||||||||||| |||||||| |||
Sbjct 150545 TGAGACGTACAACTTGCTGTCTGAGCGA----TACTTTACGCACGCCTCGCCAACCATGT 150490
Query 53298 TCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATG 53357
| || | || | | || || ||||| |||||||||| || | ||| ||| |
Sbjct 150489 TTGCTGCAGCAACTCAACGACCACAACTGTCGTCCTGCTTCCTGCTGACAATGTCGGACG 150430
Query 53358 ACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGG 53417
| ||||| || || ||||| || ||||| ||||||| ||||| || | | | |
Sbjct 150429 ATAGCATCGAGGGAATTTACGATACTCTCAAACAGTGTGCATTGATCTCTAAATCGGCCG 150370
Query 53418 GTGGTATCGGTATCCAC-TGC-TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGAC 53475
|||| || ||| | | ||| | | | | | || || || ||| || || ||
Sbjct 150369 GTGGCATAGGTCTTAATGTGCATTGTA--TTAGAGCTAAAGGAACATATATAGCAGGAAC 150312
Query 53476 GAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTA 53535
||| || | || | || | || |||||||| || |||| |||||| || || || ||
Sbjct 150311 GAATGGTATATCCAACGGGTTAGTACCTATGCTGCGTGTCTACAACAATACAGCGCGTTA 150252
Query 53536 CGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCA 53595
||| ||||||||||| ||||| ||| | || || || || | ||||| |||||
Sbjct 150251 CGTGGACCAGGGTGGTAACAAGCGACCTGGGGCATTTGCTATTTATTTGGAGCCATGGCA 150192
Query 53596 CGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTG 53655
| || || | |||||| | || || ||| ||| | |||||| | |||
Sbjct 150191 TGGGGATATATTTGAGTTTTTGGACCTTAAAAAGAACACGGGAAAAGAAGAGGTCCGCGC 150132
Query 53656 CCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG- 53713
| ||| |||| ||| |||||||||||||| || | ||||||| | ||| ||||
Sbjct 150131 TAGAGACATGTTCTAC-GCTCTGTGGATTCCTGATTTGTTCATGC--AGCGTGTCGAAGC 150075
Query 53714 -GACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGG 53772
|||| |||| | |||||||| |||| || || || | || | ||
Sbjct 150074 AAACGAAATGTGGAGTTTAATGTGCCCCCACGATTGTCCTGGTTTGTCGGAGACATGGGG 150015
Query 53773 TGAGGAGTTTAACGAGATGTA-TCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAG 53830
||||||||| | | | || | | | |||| || | |||| || | || | ||
Sbjct 150014 TGAGGAGTTCCAAAAACTCTACACTGGC-TACG-AGCGCGAGGGTCGTTTCACGCGACAG 149957
Query 53831 GTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCG 53890
|| ||||||| || | ||| || ||| | || ||||| ||||| ||| |||
Sbjct 149956 GTTAAGGCGCAAGATTTGTGGTTCGCCATCATAGAGTCGCAGGTTGAGACTGGAGTGCCT 149897
Query 53891 TACATGTGCTACAAGGATTCGGTCAA-CGAGAAGAGCAACCA 53931
|||||| |||||| ||| || ||| ||| ||||| |||||
Sbjct 149896 TACATGCTCTACAAAGATGCGTGCAATCGA-AAGAGTAACCA 149856
Score = 125 bits (138), Expect = 8e-24
Identities = 280/419 (67%), Gaps = 15/419 (4%)
Strand=Plus/Plus
Query 117977 AGCTGAGGCCAGTACACGTGGATCATGTTCAGCACGAGCCCCTTGATATGGGAACCGTCC 118036
|||| ||||||| ||| || | ||| | || ||||||||||| ||||| ||||||
Sbjct 21029494 AGCTCGGGCCAGTTGGTGTGAATGAAGTTGATCAGCAGCCCCTTGATGTGGGACCCGTCC 21029553
Query 118037 AGATCCGCATCGGTCATGATCATCAGGCGGCCGTACCGTAAATCTCTCAG-------GGA 118089
||||| ||||||||||||||||| |||||||| || | ||| |
Sbjct 21029554 TGATCCTGATCGGTCATGATCATCACCTTTCCGTACCGCAACGTTTTCAAATCCTCCGTC 21029613
Query 118090 GTTATAAACCTTACCATGT--TGGAGCCCGAGGATCTTTTTAAGGTTGGAAAATTCCTCA 118147
|| | || | | ||| ||||| || ||||| || | || ||| || |||| ||
Sbjct 21029614 GTGAGGTACTTCTTCTTGTACTGGAGACCCAGGATTTTGATCAGATTGTTAATTTCCGCA 21029673
Query 118148 TTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGA 118207
|| ||| | ||| || ||| || || || ||||| || |||| || ||||| |||
Sbjct 21029674 TTCTCCAGAATCTGCTTGTGGGTCGCTTCACGCACGTTCAGCAGCTTGCCGCGCAGCGGA 21029733
Query 118208 AACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCC 118267
||||| || || |||| || || || |||| || |||| | || | || || |||
Sbjct 21029734 AACACACCGTACGTGTCGCGCCCGACGACGCCCAGCCCGGACACGGCCAAGGTTTTGGCC 21029793
Query 118268 GAGTCACCCTCGGTAATAATAAGAGTGCACTCG---GTGCTGCGATGAGTACCGGCCCAA 118324
||||| ||||| || | ||| || || || | | | | |||| | |||||
Sbjct 21029794 GAGTCTCCCTCCGTCAGAATGAGCGTACAGTTGAGCGAGTTGCGC---GACCCGGCATCG 21029850
Query 118325 TTAGCATCATCCAGCTTCGGAACGCCCGTAATGCGCGACTTTTTGGACCCATCTGTCTT 118383
|| ||||| ||||||||||| | |||| | || ||| || || || ||| |||||
Sbjct 21029851 TTCGCATCCTCCAGCTTCGGGATGCCCTTGATTTTCGATTTCTTCGAGCCAGACGTCTT 21029909
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 119075 CTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCC 119134
||||| | |||| |||||||||||||| ||||| || |||||||| || | ||||
Sbjct 21030664 CTGAAAATGTTGCACAGCTTGGCACCGTACCCGTTTCGGCCACCGGTAACCTTCGCCTCC 21030723
Query 119135 TCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGAT 119175
|||||||||||||||||| ||| | || || || |||||
Sbjct 21030724 TCGTCGTTGTAGTTGGAGGAGGTGAGCAGATGGCCGAAGAT 21030764
>seq3
Length=33601328
Score = 86.0 bits (94), Expect = 7e-12
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || |||| | |||||||| | ||||| ||||| || |||| | ||
Sbjct 22123473 GGCAAAGTCGCAATGCAAACCTTCATCGCGCGAGATCAACTCATTGGAGAACGTCAAACC 22123414
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869
||||| || ||||||||||||| ||| |||||||| ||| || |||||||||||
Sbjct 22123413 CGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCGCTGAAGAAGAT 22123354
Query 74870 GCCTTCGACA 74879
||| ||||||
Sbjct 22123353 GCCCTCGACA 22123344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214625119800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |