Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1 178 1e-39
seq2 163 3e-35
>seq1
Length=37976048
Score = 178 bits (196), Expect = 1e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || || || ||||| ||||||||||| || || || ||||| ||| ||
Sbjct 36315559 AATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCATC 36315618
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | ||| ||||||| || || ||||||||||||||||| || ||||| ||
Sbjct 36315619 GGACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 36315678
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || || || ||||| || ||||||| |||||||| | ||||| ||
Sbjct 36315679 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTTTCGGACTACAA 36315738
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || ||||| || |||| ||||| |||||
Sbjct 36315739 CATCCAGAAGGAGTCGACCCTGCATCTTGTACTGCGACTTCGTGGTGG 36315786
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| ||||| || || || || ||||| || || |||||||| ||| |
Sbjct 21735487 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCG 21735428
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| ||||||| || || |||||||||||||| ||||| || || |||
Sbjct 21735427 GATACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCAG 21735368
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || || || | |||||||| | ||||| ||
Sbjct 21735367 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTACAAC 21735308
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || ||||| || || |||| || || |||||
Sbjct 21735307 ATCCAGAAGGAGTCGACGCTTCACCTGGTGCTGCGCCTCCGTGGTGG 21735261
Score = 127 bits (140), Expect = 2e-24
Identities = 238/350 (68%), Gaps = 0/350 (0%)
Strand=Plus/Minus
Query 32053 AAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCG 32112
|||||||| |||||| | || | ||||| || | || || || || |||||| |
Sbjct 21028955 AAGGTGGCCCAGCTGGCCGGTTCGGTGGCGGAAATGTCCGCTTACCATCATGGCGAGCAG 21028896
Query 32113 TCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAAC 32172
||||| ||||||| |||| || || |||||||||||||| || ||| | ||
Sbjct 21028895 TCGCTGTGCAGCACCATCATCAATCTGGCCCAGAACTTTGTCGGCAGCAACAACATCAAT 21028836
Query 32173 TTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGC 32232
| || | || || |||||||| || ||| | | || |||||||| || |||
Sbjct 21028835 CTGCTGTACCCGGGCGGTCAGTTTGGTACGCGGTTGACGGGCGGCAAGGACAGCGCTAGC 21028776
Query 32233 TCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGGAC 32292
| ||||||||||||||| || | | ||||||| || ||| | ||| |||
Sbjct 21028775 CCGCGTTACATCTTCACCATGCTTTCGTCACTGACGCGCCTCATCTTCCATCCGCTCGAC 21028716
Query 32293 GATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGT 32352
|| || ||||| ||||| | | || ||| ||||| |||| ||| | | ||
Sbjct 21028715 GACCCGCTGCTCGAGTACCAGTACGAGGACAACCAGCGCATCGAACCGATCTGGTATCTG 21028656
Query 32353 CCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402
|| | |||||||| | ||||||||||||| ||||| |||||||||||
Sbjct 21028655 CCCATCATTCCGATGTTGCTGGTGAACGGTGCCGAAGGTATCGGAACGGG 21028606
Score = 105 bits (116), Expect = 8e-18
Identities = 184/268 (69%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 31176 TGGGTCCAAAAAGTCTCGAATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGG 31235
||| || || || || ||| | ||| || |||||||| || || || ||| |||||
Sbjct 21029901 TGGCTCGAAGAAATCGAAAATCAAGGGCATCCCGAAGCTGGAGGATGCGAACGATGCCGG 21029842
Query 31236 TACCCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCT 31295
| | ||| |||| | | || ||||| ||| | || ||||| |||||||| || | |
Sbjct 21029841 GTCGCGCAACTCGCTCAACTGTACGCTCATTCTGACGGAGGGAGACTCGGCCAAAACCTT 21029782
Query 31296 TGCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGG 31355
|| | | || || | || || |||||| | ||| ||| ||||||||||| || ||
Sbjct 21029781 GGCCGTGTCCGGGCTGGGCGTCGTCGGGCGCGACACGTACGGTGTGTTTCCGCTGCGCGG 21029722
Query 31356 CAAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTC 31415
||||| || ||||| ||||| || || || ||| || ||| |||| || ||
Sbjct 21029721 CAAGCTGCTGAACGTGCGTGAAGCGACCCACAAGCAGATTCTGGAGAATGCGGAAATTAA 21029662
Query 31416 CAACCTGAAAAAGATCCTCGGGCTTCAG 31443
||| |||| || ||||| || || |||
Sbjct 21029661 CAATCTGATCAAAATCCTGGGTCTCCAG 21029634
Score = 82.4 bits (90), Expect = 9e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 60974 CCGGTTCCATAGTATAACGGTTAGTACACAGGACTCTGAATCCTGTAATGGGAGTTCGAT 61033
|||||||||| || |||||||||| || ||||||||||||||||| || |||||| |
Sbjct 25044371 CCGGTTCCATGGTGTAACGGTTAGCACTCAGGACTCTGAATCCTGCGATCCGAGTTCAAA 25044430
Query 61034 TCTCCCTGGAACCTTCCTCT 61053
|||| |||||||| ||||
Sbjct 25044431 TCTCGGTGGAACCTCGCTCT 25044450
>seq2
Length=51801758
Score = 163 bits (180), Expect = 3e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || || ||||| || ||||| ||||| ||| ||
Sbjct 21000603 ATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCG 21000544
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || ||||||| || |||||||||||||| || ||||| ||||| |||
Sbjct 21000543 GATACGATTGAGAACGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAG 21000484
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || ||||||| ||| || || | ||||| ||
Sbjct 21000483 CAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGCACGCTGTCCGACTACAAC 21000424
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| ||||| || || || || | ||| | ||||| || ||||||
Sbjct 21000423 ATCCAGAAGGAGTCTACGCTGCACTTGGTCCTACGTCTGCGTGGTGGA 21000376
Score = 159 bits (176), Expect = 4e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| | || |||||||| || ||||| ||||| ||| |
Sbjct 36664692 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCTTCG 36664751
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || ||||||| || || |||||||||||||| ||||||||||| |||
Sbjct 36664752 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 36664811
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || ||||| | |||||||| | || |||||
Sbjct 36664812 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACCCTGTCCGATTATAAC 36664871
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| ||||| || || || || | ||| | ||||| || ||||||
Sbjct 36664872 ATCCAGAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTGCGTGGTGGA 36664919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570308967095120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |