Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 >seq3 Length=33601328 Score = 113 bits (124), Expect = 4e-20 Identities = 235/348 (68%), Gaps = 8/348 (2%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || || || || || ||||||| ||| || || |||||||| || ||||| || || Sbjct 27417900 AGTCCCGTTACATGCGCGATCATGTGCGTCAGCAGCGAGTAGCTCGCAATGTTGAATGGC 27417959 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || ||||| | || | || | ||||| | ||| || || ||||| |||| | Sbjct 27417960 ACGCCCAGCCCAACATCTGCGGATCGTTGGTACATCTGGCAGGACAGCTCACCGTTTGCC 27418019 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121 ||||||||||| || |||||| || ||||| ||||| | | | || ||| Sbjct 27418020 ACGTAAAACTGCACCAAACAGTGGCAGGGCGGAAGGGCCATAATGGGAATATCCACCGGG 27418079 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181 |||||||||| || |||||| |||| || || |||||| | | ||| | | Sbjct 27418080 TTCCAGGCGCTCAGGATGATCCGCCGATCGGTGGGATTGTTCTTCAGCTTGTCGATGATT 27418139 Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTC-CGT---GTACTC 30237 | ||||||||| ||| | |||| ||| | | || || | ||| |||| Sbjct 27418140 TCCGCCAGCTGATCTTTACCCTTGCCCGTGTAAT----CATCGTGGCACGTGCCGTACGT 27418195 Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30285 ||||| || || | |||||||||||| || || || |||||||| || Sbjct 27418196 GGCTCCAAAGTGGCGCCACTGGAACCCATAAACTGGACCCAGGTCCCC 27418243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309404666492