Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3 145 7e-30 >seq3 Length=33601328 Score = 145 bits (160), Expect = 7e-30 Identities = 233/335 (70%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 ||||| |||||||||| ||| ||||| | ||| || ||||||||||| ||||| || | | Sbjct 27417909 ACATGCGCGATCATGTGCGTCAGCAGCGAGTAGCTCGCAATGTTGAATGGCACGCCCAGC 27417968 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 || | ||| | |||||||| || | ||||||||||||||| || || || ||||| || Sbjct 27417969 CCAACATCTGCGGATCGTTGGTACATCTGGCAGGACAGCTCACCGTTTGCCACGTAAAAC 27418028 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || | |||||| || || || ||||| | || | |||| ||||||||| ||| Sbjct 27418029 TGCACCAAACAGTGGCAGGGCGGAAGGGCCATAATGGGAATATCCACCGGGTTCCAGGCG 27418088 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGC 6856 | || | ||||| | || || || ||||| ||||||| | | | |||| Sbjct 27418089 CTCAGGATGATCCGCCGATCGGTGGGATTGTTCTTCAGCTTGTCGATGATTTCCGCCAGC 27418148 Query 6857 TGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGT 6916 || || |||| |||| || || | | || | | ||| || |||||||| Sbjct 27418149 TGATCTTTACCCTTGCCCGTGTAATCATCGTGGCACGTGCCGTACGTGGCTCCAAAGTGG 27418208 Query 6917 CTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 | |||||||||||| || || || |||| ||| || Sbjct 27418209 CGCCACTGGAACCCATAAACTGGACCCAGGTCCCC 27418243 Score = 145 bits (160), Expect = 7e-30 Identities = 233/335 (70%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || ||| |||| || || || |||||||||||| | |||||||| || ||| | | Sbjct 27418243 GGGGACCTGGGTCCAGTTTATGGGTTCCAGTGGCGCCACTTTGGAGCCACGTACGGCACG 27418184 Query 34454 AGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTG 34513 || | | || || |||| |||| || |||||| | | | ||||||| || Sbjct 27418183 TGCCACGATGATTACACGGGCAAGGGTAAAGATCAGCTGGCGGAAATCATCGACAAGCTG 27418124 Query 34514 AAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCT 34573 ||| || || || | ||||| | || |||| ||||||||| |||| | || Sbjct 27418123 AAGAACAATCCCACCGATCGGCGGATCATCCTGAGCGCCTGGAACCCGGTGGATATTCCC 27418064 Query 34574 CTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTG 34633 | ||||| || || || |||||| | || || ||||| || || || |||||| Sbjct 27418063 ATTATGGCCCTTCCGCCCTGCCACTGTTTGGTGCAGTTTTACGTGGCAAACGGTGAGCTG 27418004 Query 34634 TCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCT 34693 ||||||||| | || |||||||| | ||| | ||| | || ||||| ||||||||||| Sbjct 27418003 TCCTGCCAGATGTACCAACGATCCGCAGATGTTGGGCTGGGCGTGCCATTCAACATTGCG 27417944 Query 34694 AGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 || ||| | ||||| ||| |||||||||| ||||| Sbjct 27417943 AGCTACTCGCTGCTGACGCACATGATCGCGCATGT 27417909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261273740720