Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 seq2 82.4 7e-11 >seq1 Length=37976048 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || ||||| ||| || || || || || |||| || || ||| | Sbjct 21735272 GCGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCC 21735331 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || ||||||||||| || | || | || ||| || Sbjct 21735332 GTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTT 21735391 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| || || | || | | |||||| | ||| || || | ||||| Sbjct 21735392 GTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGAT 21735451 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 | || ||||| || ||||| || ||||| |||||| Sbjct 21735452 GGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATC 21735488 >seq2 Length=51801758 Score = 82.4 bits (90), Expect = 7e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||||| || ||||| ||| || || || || || |||| || || || | Sbjct 21000389 CGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGACCA 21000448 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||| || || || || |||||||||||||| || | ||| | || || ||| Sbjct 21000449 TCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCTTCCTTG 21000508 Query 39190 TCCATGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 ||| ||| | | || || | || | | |||||| | ||| || |||| ||||| Sbjct 21000509 TCC-TGAATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGCTCGACCTCCAGAGTGAT 21000567 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | ||||| ||||| || || || || || ||||| || Sbjct 21000568 GGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATGTT 21000606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544547747513