Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 136 9e-27 seq2 123 6e-23 >seq1 Length=37976048 Score = 136 bits (150), Expect = 9e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| ||| ||||| || || || || || || |||| ||||| || | | || Sbjct 36315781 ACGAAGTCGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 36315722 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || || || || || || || Sbjct 36315721 ACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCC 36315662 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||||||||| || | || || || | Sbjct 36315661 CTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAG 36315602 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || | ||||| | ||| | |||||||| Sbjct 36315601 TGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTT 36315557 >seq2 Length=51801758 Score = 123 bits (136), Expect = 6e-23 Identities = 173/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 225477 AAATAAAATATTCTA--ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACA 225534 || ||| | |||| | ||| || | ||||| | ||| || || || || || |||| Sbjct 21000365 AATTAATACATTCCACCACGCAGACGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATG 21000424 Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 ||||| |||| || || | ||||| || |||||||| |||||||||||||| || || Sbjct 21000425 TTGTAGTCGGACAGCGTGCGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGC 21000484 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 || || || ||||| ||||||||||| || |||||| |||||| || || || || Sbjct 21000485 TGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCAATCGTATCC 21000544 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || | || || || | ||||| ||||| || |||| || || | ||| | ||||| Sbjct 21000545 GATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATG 21000604 Query 225715 TT 225716 || Sbjct 21000605 TT 21000606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528128859494