Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 >seq3 Length=33601328 Score = 96.9 bits (106), Expect = 3e-15 Identities = 231/346 (67%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || || || || || ||||||| ||| || || |||||||| || ||||| || || Sbjct 27417900 AGTCCCGTTACATGCGCGATCATGTGCGTCAGCAGCGAGTAGCTCGCAATGTTGAATGGC 27417959 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || ||||| | || | || | ||||| | ||| || || ||||| || | Sbjct 27417960 ACGCCCAGCCCAACATCTGCGGATCGTTGGTACATCTGGCAGGACAGCTCACCGTTTGCC 27418019 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 27387 ||||||||||| | |||||| || ||||| ||||| | | | || ||| Sbjct 27418020 ACGTAAAACTGCACCAAACAGTGGCAGGGCGGAAGGGCCATAATGGGAATATCCACCGGG 27418079 Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 27447 |||||||||| || |||||| |||| || || |||||| | | ||| | | Sbjct 27418080 TTCCAGGCGCTCAGGATGATCCGCCGATCGGTGGGATTGTTCTTCAGCTTGTCGATGATT 27418139 Query 27448 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCT--CATGTCCGTGTACTCTG 27505 | ||||||||| ||| | |||| ||| || | | | || || | |||| | Sbjct 27418140 TCCGCCAGCTGATCTTTACCCTTGCCCGTGTAATC-ATCGTGGCACGTGC-CGTACGTGG 27418197 Query 27506 CTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 |||| || || | ||| |||||||| || || || |||||||| || Sbjct 27418198 CTCCAAAGTGGCGCCACTGGAACCCATAAACTGGACCCAGGTCCCC 27418243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506294822831