Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 425 8e-114 >seq1 Length=37976048 Score = 425 bits (470), Expect = 8e-114 Identities = 1224/1877 (65%), Gaps = 22/1877 (1%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 ||||||||||| | | | || || || || |||| ||| ||||| || ||||| || Sbjct 148854 GTAAACTGAATCGCATTAACAGCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTAAGG 148913 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 |||| |||| ||||||||||| || ||| ||||| || | || || |||| Sbjct 148914 CCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACG 148973 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 |||||||| | ||||| |||||| || || || |||| ||| ||||||||||| || Sbjct 148974 TGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGCCATTTTAATG 149033 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC-TTGTTTGATATCATCTGGAAG 77020 || || | |||||||| | |||||| | | ||| | || | | |||| Sbjct 149034 CAAGTTTTCACTGATATTTCCCAGACCGTTTTGTACAGATTGCGT-ATGTGTTGCGGAAT 149092 Query 77021 GTT---TGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATT 77077 | | ||||||| || || ||| | | | || | || || || ||||||| Sbjct 149093 TTCCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCATC 149152 Query 77078 CCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCC 77137 ||| | | | ||| || | | | | || | |||| |||| || | |||||||||||| Sbjct 149153 CCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACCACTTGAAATTCTCC 149212 Query 77138 AGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 77197 || | || ||||| |||| | || || || ||||| | ||| || ||||| || Sbjct 149213 TGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCC 149272 Query 77198 CAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 77257 | ||||| ||||| ||||| ||||||||||| || | | | ||| | | ||| Sbjct 149273 GAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACC 149332 Query 77258 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317 | || ||||| | || || | ||||| ||| | |||| || || Sbjct 149333 GTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATTCTGTGGGCTTCCTGTC 149392 Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGG 77377 ||| | ||||||||| |||||||| | ||| | ||||| ||||||||| || || Sbjct 149393 CCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCATCATATGTTTCGTATGG 149452 Query 77378 TCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAA 77437 || || |||| | || || || ||||| | ||| ||| ||||||| ||||| || Sbjct 149453 ACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAA 149512 Query 77438 AATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAA 77497 || | | ||| | || ||||| ||| ||| | |||| | | | || || Sbjct 149513 CATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAA 149572 Query 77498 GGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTT 77557 |||||||| | || || ||||| ||||| || || | || | | |||| || || Sbjct 149573 AGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGCGCATATTAGATCGCTT 149632 Query 77558 AGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTAC 77617 ||||| || | |||||| || || || || || ||||| || ||||| | | ||| Sbjct 149633 TGCTTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACAGT 149692 Query 77618 TTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC---TATAACAAACATGTT 77674 ||| | || |||||||| || ||||| || | | ||| | | ||||||||||| Sbjct 149693 TTTGGCTACCTCCTTTAGCTTCGCGAAATCGTATGTACGATCGGGTTTTACAAACATGTT 149752 Query 77675 CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA---TATTGTAT 77731 | ||| || || || |||||||| || || | |||| | || | | |||| | Sbjct 149753 TAGAGCGATCGAGGCCAGATTACACACAGCAATTTCAT---CTTTTGAAGAGTATTCCAC 149809 Query 77732 TATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTT 77791 || ||||| || || || ||| ||||| || || | ||||||||||| |||||| Sbjct 149810 AATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCG 149869 Query 77792 ATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAAT 77851 |||||| | || || || || || | || || || |||| ||| || || || || Sbjct 149870 ATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGAT 149929 Query 77852 AGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTG 77911 | ||| | || || || | | || | || | ||| | || || Sbjct 149930 GGCGAACCACAAATCTTGCGCCTTAACCTGTCGCGTGAAACGACCCTCGCGCTCGTAGCC 149989 Query 77912 AGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGG 77971 ||| || || || || || || ||||| || ||| ||||| || || | || Sbjct 149990 AGTGTAGAGTTTTTGGAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGGGG 150049 Query 77972 GCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCA 78031 |||||| || ||| | | | | | || || | ||| || | |||||| ||||| Sbjct 150050 GCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTGCATGAACAAATCAGGAATCCA 150109 Query 78032 TAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATC 78091 ||||| || | |||| | | ||||| ||||| || ||||||||||| || Sbjct 150110 CAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAAGGTC 150169 Query 78092 GAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCG 78151 | |||||| | ||||| ||||||||| || | ||| || || | | |||||||| Sbjct 150170 CAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCG 150229 Query 78152 TTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAAT 78211 || ||||| ||||| || | || | || || || || || || | || ||| || | Sbjct 150230 CTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGTAC 150289 Query 78212 AATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACT 78271 | ||||| ||| | ||||| ||||| | ||||| |||| | || | |||| Sbjct 150290 TAACCCGTTGGATATACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATA----C 150345 Query 78272 AATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATG 78327 |||| | || ||||| || || ||| ||||| || | || || |||| | | Sbjct 150346 AATGCACATTAAGACCTATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAG 150405 Query 78328 TATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTT 78387 ||||||| || ||||| || || || ||| ||| | || || || ||| |||| || Sbjct 150406 TATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTCAGCAGGAAGCAGGACGACAGTT 150465 Query 78388 GATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAG 78447 | | | |||| ||||| ||| | || || || || |||||||| || |||| Sbjct 150466 GTGGTCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAG 150525 Query 78448 AAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTA 78507 | || | ||||| || ||||| || | || ||||| ||| || || | || | Sbjct 150526 ACAGCAAGTTGTACGTCTCAATTGCAGCATCAATGTCTGCACCATGTATGCCGATAGCAA 150585 Query 78508 CACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATG 78567 ||||||| | ||| || || || | ||| || |||| || |||||||||| ||||| Sbjct 150586 CACGCATGAGCATGTGTTGTGGCCGTTCTACAATCTTCCCTTTAATTTTCAACAGGTATG 150645 Query 78568 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAA 78627 || |||| || ||||| ||||| ||||| ||||| |||||| | ||||| || || Sbjct 150646 ATCTTTCTAATGTTTTGAAACCGAAATAATTGTAACCAAAGTCACGGTCGTAGATGATTG 150705 Query 78628 CAGAATTTAGTTTATCT 78644 ||||||| ||| |||| Sbjct 150706 CAGAATTAAGTCGATCT 150722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667054644640