Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 5e-31
seq1 136 3e-27
>seq2
Length=51801758
Score = 149 bits (164), Expect = 5e-31
Identities = 173/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
||||| || | ||| | | |||| ||| || || |||||| |||||||| ||||||
Sbjct 36664921 ATTCCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCG 36664862
Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
| || || |||| ||||||||||| ||||| |||||||||||||||||||||| |
Sbjct 36664861 GACAGGGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGA 36664802
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||||| |||| | ||||| || | | ||
Sbjct 36664801 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTATCCGAAGGCTC 36664743
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| || || ||||| || || | ||||||||||||||| |||||
Sbjct 36664742 CACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 36664692
Score = 141 bits (156), Expect = 7e-29
Identities = 178/242 (74%), Gaps = 2/242 (1%)
Strand=Plus/Plus
Query 44101 TTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||| | |||||| || | ||| | | |||| ||| ||||| |||||| ||||||||
Sbjct 21000367 TTAATACATTCCACCACGCAGACGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATGTT 21000426
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
||| |||| || ||| | || ||||||||||| || || ||||| | |||||||||
Sbjct 21000427 GTAGTCGGACAGCGTGCGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTG 21000486
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279
||||| || | |||||||| ||| ||||| ||| | | |||| | || || || |
Sbjct 21000487 ATCTGGGGGAATGCCTTCCTTGTCCTGAATCTT-TGCCTTCACGTTCTCAATCGTATCCG 21000545
Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
| || ||||||| || || |||||||| || |||||||||||||| || ||||||
Sbjct 21000546 ATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATGT 21000605
Query 44340 TG 44341
||
Sbjct 21000606 TG 21000607
>seq1
Length=37976048
Score = 136 bits (150), Expect = 3e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||||||||||||||| |||||| ||||||||||| |||| || || ||||
Sbjct 21735275 CAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTC 21735334
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
||||||||||| ||||| ||||| | |||||||||||| | || | || ||||| ||
Sbjct 21735335 TTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTC 21735394
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
| ||||| ||||| | | || || || | || || ||||| | || || ||
Sbjct 21735395 CTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGT 21735454
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| ||||||||||| || |||||||| |||||
Sbjct 21735455 CTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 21735487
Score = 118 bits (130), Expect = 8e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||| || || || || || || |||||| ||||||||||| || | || ||
Sbjct 36315777 AGTCGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGG 36315718
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| ||||| ||||||| |||||||||||||| || | || |||
Sbjct 36315717 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCC 36315658
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| |||||| ||||| | | |||||||| | | || ||||| | ||
Sbjct 36315657 TTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTG 36315598
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || ||||| || |||||||| || |||||
Sbjct 36315597 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 36315560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989518136017
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |