Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 149 5e-31 seq1 136 3e-27 >seq2 Length=51801758 Score = 149 bits (164), Expect = 5e-31 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 ||||| || | ||| | | |||| ||| || || |||||| |||||||| |||||| Sbjct 36664921 ATTCCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCG 36664862 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | || || |||| ||||||||||| ||||| |||||||||||||||||||||| | Sbjct 36664861 GACAGGGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGA 36664802 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||||| |||| | ||||| || | | || Sbjct 36664801 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTATCCGAAGGCTC 36664743 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || ||||| || || | ||||||||||||||| ||||| Sbjct 36664742 CACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 36664692 Score = 141 bits (156), Expect = 7e-29 Identities = 178/242 (74%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 44101 TTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||| | |||||| || | ||| | | |||| ||| ||||| |||||| |||||||| Sbjct 21000367 TTAATACATTCCACCACGCAGACGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATGTT 21000426 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| |||| || ||| | || ||||||||||| || || ||||| | ||||||||| Sbjct 21000427 GTAGTCGGACAGCGTGCGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTG 21000486 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279 ||||| || | |||||||| ||| ||||| ||| | | |||| | || || || | Sbjct 21000487 ATCTGGGGGAATGCCTTCCTTGTCCTGAATCTT-TGCCTTCACGTTCTCAATCGTATCCG 21000545 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 | || ||||||| || || |||||||| || |||||||||||||| || |||||| Sbjct 21000546 ATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATGT 21000605 Query 44340 TG 44341 || Sbjct 21000606 TG 21000607 >seq1 Length=37976048 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||||||||||||| |||||| ||||||||||| |||| || || |||| Sbjct 21735275 CAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTC 21735334 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||||||||| ||||| ||||| | |||||||||||| | || | || ||||| || Sbjct 21735335 TTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTC 21735394 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | ||||| ||||| | | || || || | || || ||||| | || || || Sbjct 21735395 CTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGT 21735454 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||||||||| || |||||||| ||||| Sbjct 21735455 CTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 21735487 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||| || || || || || || |||||| ||||||||||| || | || || Sbjct 36315777 AGTCGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGG 36315718 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| ||||| ||||||| |||||||||||||| || | || ||| Sbjct 36315717 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCC 36315658 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| |||||| ||||| | | |||||||| | | || ||||| | || Sbjct 36315657 TTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTG 36315598 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || ||||| || |||||||| || ||||| Sbjct 36315597 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 36315560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989518136017