Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq450 109 4e-19 >seq450 Length=2355463 Score = 109 bits (120), Expect = 4e-19 Identities = 157/220 (71%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 |||||||| || |||||| || | | || ||||| ||||||||||| ||||| || Sbjct 1927742 GTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGGCACGCCC 1927683 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 | || | ||||| || | |||||||| ||||| || |||| |||||||| || || Sbjct 1927682 AGACCTACGTCAGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACTAACGAAA 1927623 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAA 101932 || || || || || ||||| | |||| |||||||| || ||| ||||||| Sbjct 1927622 AACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGGAATATCAGAAGGATTCCAA 1927563 Query 101933 GCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTA 101972 || ||||| | || | | ||| |||||| ||||| ||| Sbjct 1927562 GCGCACATGATGATTCGACGATC-GTAGGGATTGTTCTTA 1927524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361245855062714