Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq450 114 2e-20 >seq450 Length=2355463 Score = 114 bits (126), Expect = 2e-20 Identities = 236/346 (68%), Gaps = 4/346 (1%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| || |||| ||||| |||||||| |||||||||||| ||||| |||||| Sbjct 1927748 AGTCCGGTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGGC 1927689 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| || | ||| |||| || || |||| ||| || || ||||| || | Sbjct 1927688 ACGCCCAGACCTACGTCAGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACTA 1927629 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 ||| | ||||| || | |||||| ||||| || |||||| || | || | || Sbjct 1927628 ACGAAAAACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGGAATATCAGAAGGA 1927569 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 ||||| ||| | || || | | | || | ||| || |||| || | | |||| Sbjct 1927568 TTCCAAGCGCACATGATGATTCGAC-GATCGTAGGGATTGTTCTTAATTTTTTCGATCAC 1927510 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGG-AGTCCACGTACGCGG 146047 || ||||| || | ||||| || |||||| ||| ||| | ||| | || Sbjct 1927509 TTCAGCCAGCTGATCTATTCCCTGACCTGTGTAATC-GTCGTGGCATGTTTTGTAGGTGG 1927451 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 | || ||||| | |||||| ||||| || || || |||| ||||| Sbjct 1927450 CACCAAAGTGGCGCCACTGAAACCCATATACCGGGCCCAAATCCCC 1927405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590067845584560