Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq450 105 5e-18 >seq450 Length=2355463 Score = 105 bits (116), Expect = 5e-18 Identities = 153/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||||||| |||||||| || | | || ||||| ||||||||||| ||||| || Sbjct 1927742 GTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGGCACGCCC 1927683 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || || | ||||| || | |||||| | |||||| || |||| |||||||| || || Sbjct 1927682 AGACCTACGTCAGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACTAACGAAA 1927623 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| ||| || || || || | ||||| || |||| ||| | ||||||| Sbjct 1927622 AACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGGAATATCAGAAGGATTCCAA 1927563 Query 97297 GCACACATCAACATTCTTCTATCGGTTGGGTTTGT 97331 || ||||| | |||| | ||| || ||| |||| Sbjct 1927562 GCGCACATGATGATTCGACGATC-GTAGGGATTGT 1927529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346778869113980