Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq283 93.3 3e-14 >seq283 Length=5471375 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33525 CGATGGGTGCAAATGCGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGA 33584 ||| || | ||| | | ||||||| ||||| | | || || || |||| ||||| Sbjct 4914419 CGAGGGCTACAAGTTCTGCAAGATCCGTGTGCGCTCGGTGCGTATCCCGCAGATCGGCGA 4914478 Query 33585 CAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGG 33643 ||||||||| ||| ||||| ||||| || |||||||| || ||| |||| || Sbjct 4914479 CAAGTTTGCGTCGCGCCACGG-ACAGAAAGGTACGTGCGGTATACAGTATCGCCAGGAGG 4914537 Query 33644 ACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCC 33703 |||||||||||||| ||| ||| | |||||| | |||| |||||||| || ||| Sbjct 4914538 ACATGCCGTTCACGTGCGAGGGCATTACGCCGGACATCATCATTAACCCGCACGCCATCC 4914597 Query 33704 CCTCGCGCATGAC 33716 | || || ||||| Sbjct 4914598 CGTCCCGTATGAC 4914610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356228329301242