Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq472 356 3e-93 seq328 113 6e-20 >seq472 Length=2253382 Score = 356 bits (394), Expect = 3e-93 Identities = 1204/1854 (65%), Gaps = 32/1854 (2%) Strand=Plus/Plus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || || || ||||| ||||||||||| || ||||| | || | |||| || |||||| Sbjct 817678 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAATCCCATCTTCCAGCCATAGAAA 817737 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 817738 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 817797 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 |||||||| || || || | ||||| |||||||| ||| ||| || | || ||| Sbjct 817798 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 817857 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATGGA 78974 || | ||||| || | |||| ||| || | || | | | ||| | || || Sbjct 817858 CATACCGTTTTGTACAGGTCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 817916 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 |||| | | || ||| ||||| || || || ||| | | | ||| || Sbjct 817917 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 817976 Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094 | | || ||||| | || || || || || || || |||| || | || | |||| Sbjct 817977 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 818036 Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154 || || || || || || | ||||||||| || || | |||||| || || || || Sbjct 818037 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 818096 Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTT 79214 ||| ||||| || |||| || | ||| | || |||| ||| || || || Sbjct 818097 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTT 818156 Query 79215 TAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 | |||| | ||| ||||| | ||| | ||||| | || || || | || Sbjct 818157 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 818216 Query 79275 ACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATT 79333 || || || | || | ||| ||| || || || ||||| || |||| || | Sbjct 818217 GCCCTTGCTCACCGGACTGCCCTC-GTACGTCTCGTACGGTCCATCTCGAGCGGCCAACT 818275 Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 79393 |||| ||||| || | || ||||| || ||||||||||| || | | ||| || | || Sbjct 818276 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGTTGATTTAGCTTTT 818335 Query 79394 GTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 79453 | || ||| ||| || | ||||| | || || ||||| || || | || || | Sbjct 818336 GAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCA 818395 Query 79454 CACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 79513 | || || ||||| || || || | | |||| || | ||| || || | ||||| | Sbjct 818396 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 818455 Query 79514 AATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTTTA 79570 |||| | ||| || ||||| || ||||| | | || | ||| | | || ||||| | Sbjct 818456 AATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGT--CTTAG-CGACTTCCTTCA 818512 Query 79571 GTTTGAGAAAATCAAA----TCGTCCATCTATTACAAACATGTTCAACGCGACAGATGCC 79626 | || ||| ||| | | ||| || |||||||||||||||| |||| || ||| Sbjct 818513 GCTTTGCAAAGTCATACGTTTTGTCTTGCT-TTACAAACATGTTCAAGGCGATCGAGGCC 818571 Query 79627 AGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGCAGAGGT 79684 ||||| || || |||||||||| | || || || | | || |||||||| | || Sbjct 818572 AGATTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATCTCAGTGCACAAGT 818629 Query 79685 TACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 79744 | ||| || ||||| || | ||| || || ||||| || || || |||||||| | Sbjct 818630 TGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGT 818689 Query 79745 AAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 79804 | || ||| |||| || ||||| | ||| ||||| || ||||| ||| | | Sbjct 818690 ACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCT 818749 Query 79805 GAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATAATCGTTC 79862 | ||||| | | | | | ||| | ||||| ||||| | || || Sbjct 818750 GCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTC--TC 818807 Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922 |||||| || ||||| || || || ||||| |||| || ||||||| ||| Sbjct 818808 GAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCA 818867 Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982 | | | | ||| || || | ||| || || || || ||||| || || |||| | Sbjct 818868 CATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCG-TAAA-AC 818925 Query 79983 ATCTCTGGTTCTATG--CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || || | | |||||| || || || || || || |||||||| ||| | | Sbjct 818926 ATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAAT 818985 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 |||||| ||||||||| || | || ||||| | |||| || || ||||| || ||| Sbjct 818986 ATATCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCC 819045 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 ||||| | ||| | || || || || || || | || ||| || | | ||| || ||| Sbjct 819046 TGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAT 819105 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 80219 | || || || |||||||| || |||| | || || ||| | | | | || || Sbjct 819106 ATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCC 819164 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || || ||| || || |||| || || | || | ||| || ||||||||||| Sbjct 819165 GATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTC 819224 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 |||||||| || |||| | | || || ||| || | ||| |||| || | Sbjct 819225 AATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTGGC 819284 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 ||| ||| | || || || ||||| ||||| | || ||||| |||||||| || Sbjct 819285 CGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGT 819344 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 ||| || |||| || || ||| ||| || || | || || ||||| | |||||| Sbjct 819345 CTCGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTG 819404 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519 ||| || | || ||||| || || || |||| ||||| ||| |||||| ||||| Sbjct 819405 CTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGTAAGTATGATCGTTCCAAGGTTTT 819464 Query 80520 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 ||| || ||||||||||| ||||| || |||||||| || ||||||| || Sbjct 819465 AAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATGATGGCCGAGTTCAG 819518 >seq328 Length=4755327 Score = 113 bits (124), Expect = 6e-20 Identities = 182/259 (70%), Gaps = 7/259 (3%) Strand=Plus/Minus Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||||| || || || ||||||||||| || ||||| | || || ||||| Sbjct 1649464 TTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTC 1649405 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || |||||||| ||||| ||||||||||| || ||||| || || | || || Sbjct 1649404 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTA 1649345 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127 || |||||||| || || || || || || || || | | ||| ||| | |||| Sbjct 1649344 CCGCTGAAGAAGATACCCTCAACCGCAGCGAAAGCCACGACCCGCTCGCCAAAGTTGGC- 1649286 Query 50128 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182 || || || ||||| || | |||||||| |||||| || || || |||| || Sbjct 1649285 CT-TCTTGCTCGAGATCCAGTTCAGCGCCCAATCCGCCTTCCGCTTCACGCACGGCAGCG 1649227 Query 50183 TTTCTATGGCATTAAAGAG 50201 |||| |||||||| || || Sbjct 1649226 TTTCGATGGCATTGAACAG 1649208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718257900270960