Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq882 109 5e-19 >seq882 Length=7972872 Score = 109 bits (120), Expect = 5e-19 Identities = 132/178 (74%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 5321 TCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAG 5380 ||||| || | ||| || || | || || |||||||| ||||||| ||| || || Sbjct 56833 TCGCAAATAAACTGTGCGATGCGATCCCCTTTCTTAACTTCAAAGTT--TGTCTCGGAGT 56890 Query 5381 --TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCA 5438 || ||||| || || ||||| ||||| |||||||| ||||||| || || ||||||| Sbjct 56891 GATTGAACAGTACAACTCCGACGTTGCCCCGGTAGTCCTCGTCGACGACACCGGCGCCCA 56950 Query 5439 CGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACC 5496 | ||||| |||| ||| || || | ||||||||||| || | || || ||||| || Sbjct 56951 CATCGATGAAGTTTTTCACAGCCAAACCGGAACGTGGAGCCACCCGGCCATAGCATCC 57008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447743605387680