Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq472 219 1e-51 seq450 105 2e-17 >seq472 Length=2253382 Score = 219 bits (242), Expect = 1e-51 Identities = 585/882 (66%), Gaps = 14/882 (2%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| || | || || || ||||| ||||| ||| | ||||| ||||||||||| ||| Sbjct 819434 ATCAAGGGAAAAATCGTCGAGCGCCCCCAGCACATGCTGATGCGCGTTGCTATTGGCATC 819375 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 ||| || ||| | ||||| ||||| || || || || || || | ||| || Sbjct 819374 CATGGCGAGGACATCGATGCAGCGATCGAGACCTACAATCTGCTGTCCGAGCGTTACTTT 819315 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 || |||||| ||||||| |||| || | || | ||| ||| | || || ||| Sbjct 819314 ACCCACGCCTCGCCAACTATGTTTGCGGCGGCCACGCAGCGTCCCCAGCTTTCGTCCTGC 819255 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 || || | | ||| || ||| ||| ||||| |||| ||||| || ||| | ||| Sbjct 819254 TTCCTGTTGACCATGTCCGAAGATAGCATTGAGGGCATCTACGACACGCTGAAGCAGTGT 819195 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACA 363728 || || ||||| ||| || || || || || | | || | ||| | | || || | Sbjct 819194 GCCCTAATTTCAAAGTCGGCCGGTGGCATCGGACTGAACG-TGCACTGTATCCGCGCGAA 819136 Query 363729 GAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787 | | ||||| ||| || | |||||| ||||| || ||||| || ||||| || | Sbjct 819135 GGGAACGTACATCTCCGGTACGAACGGGATA-TCGAACGGTCTGGTGCCGATGCTGCGCG 819077 Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847 | | ||||||| || |||||||||| |||||||| ||||| || || || | Sbjct 819076 TCTACAACAATACGGCACGGTACGTCGATCAGGGTGGCAACAAGCGGCCTGGAGCATTCG 819017 Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACA 363907 | || ||||||||||| |||| ||||| || |||||||| || || |||||||| Sbjct 819016 CCATCTATCTCGAGCCGTGGCATGGTGATATATTCGAGTTTCTCGATCTGAAGAAAAACA 818957 Query 363908 CGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATT 363967 | || || ||||| | || ||||| || |||| || ||||| ||| | | |||| | Sbjct 818956 CCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGCACTCTGGATACCGGACCTGT 818897 Query 363968 TTATGAAGCGCGTGGAGGCAGGTAAGAA--TTGGTCACTCTTTTGCCCACACGAATGTCC 364025 | ||| |||| |||||||| | | ||| ||| || | ||||| ||||| ||||| Sbjct 818896 TCATGCAGCGTGTGGAGGC--GAACGAAATGTGGAGCCTGATGTGCCCGCACGATTGTCC 818839 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCG 364083 || || || || ||||| || || | | ||| || ||| ||| || Sbjct 818838 CGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGCTGTACACG--GGGTACGAGAAA 818781 Query 364084 GAGGGAAAGGCTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 ||||| | | | | || | || ||| | || |||||||| ||||| || || Sbjct 818780 GAGGG-TCGCTTTATGCGGCAGGTGAAGGCGCAGGATCTGTGGTTTGCGATCATCGAATC 818722 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 |||| | || || || ||| || ||| ||||||| ||| | ||||| || || || Sbjct 818721 GCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGATGCTTGCAATCGTAAAAGTAA 818662 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262 ||||||| | | || || || | |||| | || || |||||| | || ||| | Sbjct 818661 CCAGCAGAATATCGGCACCATCAAATGTTCCAACTTGTGCACTGAGATTGTGGAGTACTC 818602 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 | || ||| || ||||| || || || |||||||| Sbjct 818601 GTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATCGC 818560 >seq450 Length=2355463 Score = 105 bits (116), Expect = 2e-17 Identities = 219/314 (70%), Gaps = 14/314 (4%) Strand=Plus/Plus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||| ||| | || || || || || ||||| ||||||||||||||||| |||||||| Sbjct 1927404 AGGGGATTTGGGCCCGGTATATGGGTTTCAGTGGCGCCACTTTGGTGCCACCTACAAAA- 1927462 Query 111548 CATG-CACGACTCATATGATTCA---CAGGGAACTGATCA-ATTACAGAATGTCATTGAT 111602 |||| |||||| || | || ||||||| ||||| | | ||| || || || Sbjct 1927463 CATGCCACGAC---GATTACACAGGTCAGGGAATAGATCAGCTGGCTGAA-GTGATCGAA 1927518 Query 111603 CAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGC 111661 ||||||||||||| ||| || |||||| || || ||| | || ||||| || || Sbjct 1927519 AAAATTAAGAACAATCCCTAC-GATCGTCGAATCATCATGTGCGCTTGGAATCCTTCTGA 1927577 Query 111662 ATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGACG 111720 | || |||||||| || ||||| || || | || ||||||| || || | Sbjct 1927578 TATTCCTAACATGGCACTACCGCCATGCCA-CTGCTTGGCACAGTTTTTCGTTAGTGATG 1927636 Query 111721 GGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTA 111780 | ||| || || || |||||||| || || ||||| | ||||| || || || |||| Sbjct 1927637 GAGAGCTGTCGTGTCAGATGTATCAACGTTCGGCTGACGTAGGTCTGGGCGTGCCCTTTA 1927696 Query 111781 ATATTGCAAGTTAC 111794 | ||||| || ||| Sbjct 1927697 ACATTGCCAGCTAC 1927710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303333327149348