Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq472 324 2e-83 >seq472 Length=2253382 Score = 324 bits (358), Expect = 2e-83 Identities = 1194/1855 (64%), Gaps = 34/1855 (2%) Strand=Plus/Plus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || || || ||||| ||||||||||| || ||||| | || | |||| || || ||| Sbjct 817678 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAATCCCATCTTCCAGCCATAGAAA 817737 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 817738 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 817797 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 |||||||| || || || | ||||| |||||||| || ||| || | || ||| Sbjct 817798 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 817857 Query 62051 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATGGA 62106 || | ||||| || | |||| ||| || | || | | | ||| | || || Sbjct 817858 CATACCGTTTTGTACAGGTCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 817916 Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62166 |||| | | || ||| ||||| || || || ||| | | | ||| || Sbjct 817917 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 817976 Query 62167 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62226 | | || ||||| | || || || || || || || |||| || | || | |||| Sbjct 817977 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 818036 Query 62227 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62286 || || || ||||| || | || ||||| || || | |||||| || || || || Sbjct 818037 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 818096 Query 62287 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62346 |||||||| || |||| || | ||| | || |||| | ||| || || || Sbjct 818097 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTT 818156 Query 62347 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62406 | |||| ||||| ||||||| |||| | || | || Sbjct 818157 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 818216 Query 62407 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 62465 || || || | | || ||| | || || ||||| ||||| || | || | | Sbjct 818217 GCCCTTGCTCACCGGACTGCCCT-CGTACGTCTCGTACGGTCCATCTCGAGCGGCCAACT 818275 Query 62466 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62525 |||| ||||| || | || ||||| || ||||||||||| || | | |||||| | || Sbjct 818276 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGTTGATTTAGCTTTT 818335 Query 62526 GCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 62585 | || || ||| || | ||||| | || || ||||| || || | || || | Sbjct 818336 GAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCA 818395 Query 62586 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62645 | || || ||||| || || || | | |||| ||| | ||| || || | ||||| | Sbjct 818396 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 818455 Query 62646 AATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCA 62702 |||| | ||| || ||||| || ||||| | | || | ||| | | || ||||||| Sbjct 818456 AATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGT--CTTAG-CGACTTCCTTCA 818512 Query 62703 GTTTGAGAAAATCAAA----TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCC 62758 | || ||| ||| | | | | || |||||||||||||||| || | || ||| Sbjct 818513 GCTTTGCAAAGTCATACGTTTTGTCTTGCT-TTACAAACATGTTCAAGGCGATCGAGGCC 818571 Query 62759 AGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGAT 62816 ||||| || || |||||||||| | || || || | | ||||||||||| | | Sbjct 818572 AGATTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATCTCAGTGCACAAGT 818629 Query 62817 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 62876 | ||| |||||||| || | ||| || || ||||| || || || |||||||| | Sbjct 818630 TGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGT 818689 Query 62877 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 62936 | || ||| | || || ||||| | ||| ||||| || ||||| ||| | | Sbjct 818690 ACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCT 818749 Query 62937 GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGA 62996 | ||||| | | | | ||| | ||||| || |||| |||| Sbjct 818750 GCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGA 818809 Query 62997 ACTCGTCTCCCCAAACATTGTCC---AGTCCAGGACATTCATCCGGACACATCAACGACC 63053 |||| || ||||| ||||| || || ||||| || | ||| ||||||| || Sbjct 818810 ACTCTTCGCCCCAGG---TGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCC 818866 Query 63054 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63113 || | ||| ||| ||| || | ||| || || || || ||||| || || |||| | Sbjct 818867 ACATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCG-TAAA-A 818924 Query 63114 GATCTCTGGTTCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 || || || | | ||||| || || || || || || |||||||| ||| | | Sbjct 818925 CATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAA 818984 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 |||||| ||||||||| || | || ||||| | |||||||||| ||||| || || Sbjct 818985 TATATCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACC 819044 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 |||||| | ||| | || || || || || || | || ||| || | | ||| || || Sbjct 819045 CTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGA 819104 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGAC 63350 | | || || || || ||||| || |||| | || || ||| | | | | || | Sbjct 819105 TATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTC 819163 Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 63410 | || || || ||| || || |||| || || | || | ||| || |||||||||| Sbjct 819164 CGATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCT 819223 Query 63411 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63470 | || ||||| || |||| | | || || ||| || | ||| |||| || Sbjct 819224 CAATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTGG 819283 Query 63471 CCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACG 63530 |||| ||| | || || || ||||| ||||| | || || || |||||||| | Sbjct 819284 CCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGG 819343 Query 63531 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63590 |||| || |||| || || ||| ||| || || | || || ||||| | ||||| Sbjct 819344 TCTCGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGT 819403 Query 63591 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63650 |||| || | || ||||| || || || |||| ||||| ||| |||||| |||| Sbjct 819404 GCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGTAAGTATGATCGTTCCAAGGTTT 819463 Query 63651 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 |||| || ||||||||||| ||||| || |||||||| || ||||||| || Sbjct 819464 TAAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATGATGGCCGAGTTCAG 819518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633622384634400