Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq272 156 4e-33 >seq272 Length=5604218 Score = 156 bits (172), Expect = 4e-33 Identities = 222/308 (72%), Gaps = 6/308 (2%) Strand=Plus/Plus Query 50979 ATCCACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAAT 51038 || |||||| || |||||||| || || | |||||||| |||| ||| ||||||| || Sbjct 4888822 ATTCACGTTGAATTTACGCTTGCATCCGTCATAGTTCATGTACCGAATTTTGCCAAAGAT 4888881 Query 51039 TTTGCGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACAT 51097 || ||| || || | | |||| ||||| | || || |||||||| ||||| || | Sbjct 4888882 TTCGCGCTCCTTCCA-GCCCTGATCGTGGATGCCCGCGATCGACCACATGCAACCGACGT 4888940 Query 51098 AATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCA 51157 | ||| |||||||| ||||||| ||||| ||||||| ||| | || || | | Sbjct 4888941 ACCCGTTCGGATCGCGCCCATCCAGACTGTAGCGATCGTTCAGATAGATCGCCGTCTCAA 4889000 Query 51158 ATGCCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGT 51217 || || | | |||||| |||| ||| || ||||||||||||||||||| | Sbjct 4889001 GCGCTTCCTCGGGCGTTTTCGTCCACTCCAGAATCTTTTTGGCCCAGTACATGCGCAGGA 4889060 Query 51218 AACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTC 51275 | ||||||||||||||||| || | | |||| || ||||||||||||| ||||| Sbjct 4889061 AGCCGTGCATCTTGCCCTCCTTCACC--ATCTGCAGCTGGGCCGAGTTCCACAGATCGTC 4889118 Query 51276 GTGAGTTT 51283 || |||| Sbjct 4889119 ATGCGTTT 4889126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433321588641410