Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq1 102 9e-17 >seq1 Length=16348944 Score = 102 bits (112), Expect = 9e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 38458 TGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATTCGGGCACCGGAGACC 38517 ||||||||| ||||| ||| || ||| || ||||||| ||| |||||| | |||| Sbjct 12051370 TGAAGCAGAAACCGCAGCAGCTGAGCGACGCTGGCTTCTTCTACACGGGCATGAGCGACC 12051311 Query 38518 AGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGCCTGCGGACGATCCGT 38577 ||||| || ||| || ||||| || || ||||||||||||| | |||||| |||| Sbjct 12051310 GCGTCAAGTGCTTCAGCTGTGGCGGTGGGCTCAAGGACTGGGAGCAGGAGGACGACCCGT 12051251 Query 38578 GGGCGCAGCACGCGCGCTGGT 38598 || |||||||||| ||||| Sbjct 12051250 GGCAGCAGCACGCGATCTGGT 12051230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537595041871440