Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq450 111 1e-19 >seq450 Length=2355463 Score = 111 bits (122), Expect = 1e-19 Identities = 233/345 (68%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| || | ||| | || | | ||| ||||||||||||||||| || Sbjct 1927748 AGTCCGGTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGGC 1927689 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| ||| | ||| |||| | ||||||| |||||| || ||||| || ||| Sbjct 1927688 ACGCCCAGACCTACGTCAGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACTA 1927629 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 || |||| || || |||| || ||||| || ||||| | | || | || Sbjct 1927628 ACGAAAAACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGGAATATCAGAAGGA 1927569 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || ||||| ||||||| | ||||| ||||| || || ||| || | | Sbjct 1927568 TTCCAAGCGCACATGATGATTCGACGATCGTAGGGATTGTTCTTAATTTTTTCGATCACT 1927509 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGT-CCACGTACGCCGC 20535 | | || || || | ||||| ||||| || || | | || | ||| | || Sbjct 1927508 TCAGCCAGCTGATCTATTCCCTGACCTGTGTAATCGTCGT-GGCATGTTTTGTAGGTGGC 1927450 Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||||||| | |||||| || || || || || ||||||||||| Sbjct 1927449 ACCAAAGTGGCGCCACTGAAACCCATATACCGGGCCCAAATCCCC 1927405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441366102167760