Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq305 100 3e-16 >seq305 Length=4704006 Score = 100 bits (110), Expect = 3e-16 Identities = 197/289 (68%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 171881 GTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTG 171939 |||||||||||||| | | ||| || ||||||||| | || ||||| || || || Sbjct 1845460 GTGAAGATGTACCTGGGGCTGG-CGCTGTCCTTGCCACCCGTCAGCCGCGTACCGAACTG 1845518 Query 171940 ACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 171999 ||| | ||| | || |||||||| ||||| || | ||||| | |||| |||| Sbjct 1845519 ACCGCCCGGGTACAGCAGATTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 1845578 Query 172000 AATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGC 172059 ||||| ||| || | || |||||||||||||| ||||| ||||| || | | Sbjct 1845579 GATCGTCGAGCAGAGCGACATCTCGCCGTGATGGTAGGCGGACTTTTCCGCCACCGAACC 1845638 Query 172060 CGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGAC 172119 |||| ||| |||||||| | ||| |||| || | |||||||| |||| || Sbjct 1845639 GGCCAGCTGGGCCACCTTTACCTCGCGCTTGTCGTCACGCTTGAAGCACGTGTACAGCAC 1845698 Query 172120 CTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 172168 ||| | ||| ||||| | ||||| |||| || ||||| ||| Sbjct 1845699 CTTGCGCTGGCCCGGCTTCAACCCGTCCAGCATGCACGGAATGGAGCGC 1845747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597344535159120