Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq305 100 3e-16 >seq305 Length=4704006 Score = 100 bits (110), Expect = 3e-16 Identities = 184/267 (69%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 175901 GTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTG 175959 |||||||||||||| | | ||| || ||||||||| | || ||||| || || || Sbjct 1845460 GTGAAGATGTACCTGGGGCTGG-CGCTGTCCTTGCCACCCGTCAGCCGCGTACCGAACTG 1845518 Query 175960 ACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGAC 176019 ||| | || | || |||||||| ||||| ||| | |||| | ||||| |||| Sbjct 1845519 ACCGCCCGGGTACAGCAGATTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 1845578 Query 176020 AATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGC 176079 ||||| ||| || | || |||||||||||||| ||||| |||||||| | | Sbjct 1845579 GATCGTCGAGCAGAGCGACATCTCGCCGTGATGGTAGGCGGACTTTTCCGCCACCGAACC 1845638 Query 176080 CGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGAC 176139 |||| ||| |||||||| | ||| |||| || | |||||||| |||| || Sbjct 1845639 GGCCAGCTGGGCCACCTTTACCTCGCGCTTGTCGTCACGCTTGAAGCACGTGTACAGCAC 1845698 Query 176140 CTTTCTCTGTGAAGGCTTGAGGCCGTC 176166 ||| | ||| ||||| | ||||| Sbjct 1845699 CTTGCGCTGGCCCGGCTTCAACCCGTC 1845725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613497890028240